RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 NUP133Q8WUM0 1156 aa24.01■■□□□ 1.43
CIRBP-226ENST00000590171 ABCB11O95342 1321 aa24.01■■□□□ 1.43
CIRBP-226ENST00000590171 PALM3A6NDB9 673 aaPredicted RBP24■■□□□ 1.43
CIRBP-226ENST00000590171 SOX1O00570 391 aaPredicted RBP24■■□□□ 1.43
CIRBP-226ENST00000590171 BEX3Q00994 111 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 WTAPQ15007 396 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 GNASQ5JWF2 1037 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 SH3RF1Q7Z6J0 888 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 TLK2Q86UE8 772 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 TDHQ8IZJ6 230 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 RGS22Q8NE09 1264 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 TBC1D5Q92609 795 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 LBHD1Q9BQE6 289 aaPredicted RBP24■■□□□ 1.43
CIRBP-226ENST00000590171 DNAH12Q6ZR08 3092 aa24■■□□□ 1.43
CIRBP-226ENST00000590171 LTBP2Q14767 1821 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 TRIM43BA6NCK2 446 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 EDNRBP24530 442 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 GRM4Q14833 912 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 SART3Q15020 963 aaKnown RBP23.99■■□□□ 1.43
CIRBP-226ENST00000590171 TMEM67Q5HYA8 995 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 IQSEC1Q6DN90 963 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 FBXO11Q86XK2 927 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 DNERQ8NFT8 737 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 TRIM43Q96BQ3 446 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-226ENST00000590171 GLT1D1Q96MS3 346 aa23.99■■□□□ 1.43
CIRBP-226ENST00000590171 PQBP1O60828 265 aaKnown RBP23.98■■□□□ 1.43
CIRBP-226ENST00000590171 TROAPQ12815 778 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 SLC35G1Q2M3R5 365 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 IGDCC4Q8TDY8 1250 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 MTMR8Q96EF0 704 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 ANO2Q9NQ90 1003 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 ELP1O95163 1332 aa23.98■■□□□ 1.43
CIRBP-226ENST00000590171 SLC27A2O14975 620 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 DYNC1LI2O43237 492 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-226ENST00000590171 CLTBP09497 229 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 COL9A3Q14050 684 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-226ENST00000590171 ANKRD33Q7Z3H0 272 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 LRCH3Q96II8 777 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 MAF1Q9H063 256 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 AP5M1Q9H0R1 490 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 COL20A1Q9P218 1284 aa23.97■■□□□ 1.43
CIRBP-226ENST00000590171 MRPL11Q9Y3B7 192 aaKnown RBP23.97■■□□□ 1.43
CIRBP-226ENST00000590171 PPP1R11O60927 126 aaPredicted RBP23.96■■□□□ 1.43
CIRBP-226ENST00000590171 PDE4DQ08499 809 aa23.96■■□□□ 1.43
CIRBP-226ENST00000590171 NECTIN1Q15223 517 aa23.96■■□□□ 1.43
CIRBP-226ENST00000590171 CREB3L3Q68CJ9 461 aa23.96■■□□□ 1.43
CIRBP-226ENST00000590171 SYTL5Q8TDW5 730 aaPredicted RBP23.96■■□□□ 1.43
CIRBP-226ENST00000590171 AMNQ9BXJ7 453 aa23.96■■□□□ 1.43
CIRBP-226ENST00000590171 Q9Y3F1 56 aa23.96■■□□□ 1.43
CIRBP-226ENST00000590171 RBM47A0AV96 593 aaKnown RBP23.95■■□□□ 1.42
CIRBP-226ENST00000590171 ZBTB5O15062 677 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 FSCN1Q16658 493 aaKnown RBP23.95■■□□□ 1.42
CIRBP-226ENST00000590171 LRIT3Q3SXY7 679 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 DUSP28Q4G0W2 176 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 MCF2L2Q86YR7 1114 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 BADQ92934 168 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 CCDC136Q96JN2 1154 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 TOX2Q96NM4 488 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 MPHOSPH6Q99547 160 aaKnown RBP23.95■■□□□ 1.42
CIRBP-226ENST00000590171 WDR11Q9BZH6 1224 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 LY9Q9HBG7 655 aa23.95■■□□□ 1.42
CIRBP-226ENST00000590171 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
CIRBP-226ENST00000590171 A0A0U1RQG5 324 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-226ENST00000590171 OPLAHO14841 1288 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 PRC1O43663 620 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 CYTH3O43739 400 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 ITGB8P26012 769 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 CDK7P50613 346 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 CXCL17Q6UXB2 119 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 CATIPQ7Z7H3 387 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 HOMER1Q86YM7 354 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 VTI1AQ96AJ9 217 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 TAAR1Q96RJ0 339 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 RIOX1Q9H6W3 641 aa23.94■■□□□ 1.42
CIRBP-226ENST00000590171 DCDC2CA8MYV0 355 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 KIAA0355O15063 1070 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 CASC1Q6TDU7 716 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 PIGSQ96S52 555 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 MTA3Q9BTC8 594 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 TMEM39AQ9NV64 488 aa23.93■■□□□ 1.42
CIRBP-226ENST00000590171 LAMA3Q16787 3333 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 B4DLN1 442 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 ARVCFO00192 962 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 CFBP00751 764 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 MCM5P33992 734 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 MRPL12P52815 198 aaKnown RBP23.92■■□□□ 1.42
CIRBP-226ENST00000590171 MYL10Q9BUA6 226 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 PCDHA1Q9Y5I3 950 aa23.92■■□□□ 1.42
CIRBP-226ENST00000590171 MROH7Q68CQ1 1323 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 SH2B2O14492 632 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-226ENST00000590171 CDC45O75419 566 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 GHRHRQ02643 423 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 PPP2R5BQ15173 497 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 NSUN6Q8TEA1 469 aaKnown RBP23.91■■□□□ 1.42
CIRBP-226ENST00000590171 RMDN3Q96TC7 470 aa23.91■■□□□ 1.42
CIRBP-226ENST00000590171 SZT2Q5T011 3432 aa23.9■■□□□ 1.42
CIRBP-226ENST00000590171 ZEB2O60315 1214 aa23.9■■□□□ 1.42
CIRBP-226ENST00000590171 CABYRO75952 493 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms