RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SOWAHBA6NEL2 793 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 ASB14A6NK59 587 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 CFBP00751 764 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 SOX10P56693 466 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 FUT2Q10981 343 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 STK3Q13188 491 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 MAMDC4Q6UXC1 1216 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 FGD4Q96M96 766 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 NCOA5Q9HCD5 579 aaKnown RBP24.6■■□□□ 1.53
ATG4D-212ENST00000590096 CNPY2Q9Y2B0 182 aa24.6■■□□□ 1.53
ATG4D-212ENST00000590096 V9GY48 417 aaPredicted RBP24.6■■□□□ 1.53
ATG4D-212ENST00000590096 LCTP09848 1927 aa24.59■■□□□ 1.53
ATG4D-212ENST00000590096 CPLX1O14810 134 aa24.59■■□□□ 1.53
ATG4D-212ENST00000590096 NOL8Q76FK4 1167 aaKnown RBP24.59■■□□□ 1.53
ATG4D-212ENST00000590096 HEATR3Q7Z4Q2 680 aa24.59■■□□□ 1.53
ATG4D-212ENST00000590096 SAMD3Q8N6K7 520 aa24.59■■□□□ 1.53
ATG4D-212ENST00000590096 SLKQ9H2G2 1235 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-212ENST00000590096 PAK6Q9NQU5 681 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-212ENST00000590096 RBM27Q9P2N5 1060 aaKnown RBP24.59■■□□□ 1.53
ATG4D-212ENST00000590096 NRBP1Q9UHY1 535 aa24.59■■□□□ 1.53
ATG4D-212ENST00000590096 KIAA0100Q14667 2235 aaKnown RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 GJB1P08034 283 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 CYBAP13498 195 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 CNGA1P29973 690 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 CCND3P30281 292 aaPredicted RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 AKAP17AQ02040 695 aaKnown RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 CPLX2Q6PUV4 134 aaKnown RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 ARMCX2Q7L311 632 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 TBC1D5Q92609 795 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 MPHOSPH6Q99547 160 aaKnown RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 KIF2CQ99661 725 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 MAP3K20Q9NYL2 800 aaKnown RBP24.58■■□□□ 1.53
ATG4D-212ENST00000590096 TPCN1Q9ULQ1 816 aa24.58■■□□□ 1.53
ATG4D-212ENST00000590096 hCG_1984214I3L0E3 225 aa24.57■■□□□ 1.52
ATG4D-212ENST00000590096 OPLAHO14841 1288 aa24.57■■□□□ 1.52
ATG4D-212ENST00000590096 ALDH5A1P51649 535 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-212ENST00000590096 ZNF713Q8N859 430 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-212ENST00000590096 DNERQ8NFT8 737 aa24.57■■□□□ 1.52
ATG4D-212ENST00000590096 SYTL5Q8TDW5 730 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-212ENST00000590096 DEFB118Q96PH6 123 aa24.57■■□□□ 1.52
ATG4D-212ENST00000590096 PURBQ96QR8 312 aaKnown RBP24.57■■□□□ 1.52
ATG4D-212ENST00000590096 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-212ENST00000590096 MCM3APO60318 1980 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 LOC102724159A0A0B4J2E5 919 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 B4DLN1 442 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 GCOM1H8Y6P7 765 aaPredicted RBP24.56■■□□□ 1.52
ATG4D-212ENST00000590096 POLR2MP0CAP2 368 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 IFNAR1P17181 557 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 HSD17B4P51659 736 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 MRPL12P52815 198 aaKnown RBP24.56■■□□□ 1.52
ATG4D-212ENST00000590096 PWP2Q15269 919 aaKnown RBP24.56■■□□□ 1.52
ATG4D-212ENST00000590096 RABEP1Q15276 862 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 NTRK3Q16288 839 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 PRAMEF19Q5SWL8 479 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 TRPV1Q8NER1 839 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 GPKOWQ92917 476 aaPredicted RBP eCLIP24.56■■□□□ 1.52
ATG4D-212ENST00000590096 PHKBQ93100 1093 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 TBC1D32Q96NH3 1257 aa24.56■■□□□ 1.52
ATG4D-212ENST00000590096 POTEFA5A3E0 1075 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 PRPF3O43395 683 aaKnown RBP24.55■■□□□ 1.52
ATG4D-212ENST00000590096 PFKFB2O60825 505 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 SNAI1O95863 264 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-212ENST00000590096 GHRHRQ02643 423 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 WWC2Q6AWC2 1192 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 TRIM22Q8IYM9 498 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 U2AF1L4Q8WU68 220 aaKnown RBP24.55■■□□□ 1.52
ATG4D-212ENST00000590096 CUL5Q93034 780 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 SLC26A6Q9BXS9 759 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 RNF26Q9BY78 433 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-212ENST00000590096 ABHD16BQ9H3Z7 469 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 ZHX1Q9UKY1 873 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-212ENST00000590096 ASTN1O14525 1302 aa24.55■■□□□ 1.52
ATG4D-212ENST00000590096 MSCO60682 206 aa24.54■■□□□ 1.52
ATG4D-212ENST00000590096 SGPL1O95470 568 aa24.54■■□□□ 1.52
ATG4D-212ENST00000590096 HOXA13P31271 388 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-212ENST00000590096 GJA8P48165 433 aa24.54■■□□□ 1.52
ATG4D-212ENST00000590096 NAPAP54920 295 aa24.54■■□□□ 1.52
ATG4D-212ENST00000590096 PFKFB3Q16875 520 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-212ENST00000590096 NSUN6Q8TEA1 469 aaKnown RBP24.54■■□□□ 1.52
ATG4D-212ENST00000590096 TAAR1Q96RJ0 339 aa24.54■■□□□ 1.52
ATG4D-212ENST00000590096 SEPT4O43236 478 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 CDKL5O76039 1030 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 SLC34A2O95436 690 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 SCG2P13521 617 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 SSRP1Q08945 709 aaKnown RBP24.53■■□□□ 1.52
ATG4D-212ENST00000590096 SCRN1Q12765 414 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 ACVR2BQ13705 512 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 PPP1R18Q6NYC8 613 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 SMARCC2Q8TAQ2 1214 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 RMDN3Q96TC7 470 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 PSTPIP2Q9H939 334 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 COL20A1Q9P218 1284 aa24.53■■□□□ 1.52
ATG4D-212ENST00000590096 DDX20Q9UHI6 824 aaKnown RBP24.53■■□□□ 1.52
ATG4D-212ENST00000590096 PPFIA3O75145 1194 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 TFRCP02786 760 aaKnown RBP24.52■■□□□ 1.52
ATG4D-212ENST00000590096 ZNF865P0CJ78 1059 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-212ENST00000590096 CAPN2P17655 700 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 PDE4DQ08499 809 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 ME3Q16798 604 aa24.52■■□□□ 1.52
ATG4D-212ENST00000590096 ARHGEF16Q5VV41 709 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms