RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
HMGN1P31-201ENST00000590085 SEC63Q9UGP8 760 aaKnown RBP10.81□□□□□ -0.68
HMGN1P31-201ENST00000590085 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
HMGN1P31-201ENST00000590085 PCDHA1Q9Y5I3 950 aa10.81□□□□□ -0.68
HMGN1P31-201ENST00000590085 hCG_1642624A0A1W2PR95 340 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 PFKFB2O60825 505 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 IFNAR1P17181 557 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 HSD17B4P51659 736 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 RPS6P62753 249 aaKnown RBP10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 CCT2P78371 535 aaKnown RBP10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 TRAF1Q13077 416 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 BAATQ14032 418 aaPredicted RBP10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 RABEP1Q15276 862 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 RNF207Q6ZRF8 634 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 PDE4DIPQ5VU43 2346 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 SYNGAP1Q96PV0 1343 aa10.8□□□□□ -0.68
HMGN1P31-201ENST00000590085 PTPDC1A2A3K4 754 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 CYBAP13498 195 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 CCL5P13501 91 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 CYP2C19P33261 490 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 UBXN2AP68543 259 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 SCRN1Q12765 414 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 STK3Q13188 491 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 MTFR1Q15390 333 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 ME3Q16798 604 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 WWC2Q6AWC2 1192 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 MCF2L2Q86YR7 1114 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 ZNF713Q8N859 430 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 TBC1D5Q92609 795 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 PHKBQ93100 1093 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 GTF3C6Q969F1 213 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 PURBQ96QR8 312 aaKnown RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 RNF26Q9BY78 433 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 PAK6Q9NQU5 681 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 COL20A1Q9P218 1284 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 FRMPD4Q14CM0 1322 aa10.79□□□□□ -0.68
HMGN1P31-201ENST00000590085 CEP290O15078 2479 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 LOC102724159A0A0B4J2E5 919 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 STXBP3O00186 592 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 SCG2P13521 617 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 CALML3P27482 149 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 ST3GAL1Q11201 340 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PWP2Q15269 919 aaKnown RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PKN1Q16512 942 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 MFSD14CQ5VZR4 134 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 HEATR3Q7Z4Q2 680 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 SAMD3Q8N6K7 520 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 TRPV1Q8NER1 839 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 SYTL5Q8TDW5 730 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 SLKQ9H2G2 1235 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 BARHL2Q9NY43 387 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 MAP3K20Q9NYL2 800 aaKnown RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 BIN2Q9UBW5 565 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
HMGN1P31-201ENST00000590085 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 CD2BP2O95400 341 aaKnown RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 SNAI1O95863 264 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 CFBP00751 764 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 EDNRBP24530 442 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 CCND3P30281 292 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 ARMCX2Q7L311 632 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 NECAB1Q8N987 351 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 DNERQ8NFT8 737 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 SHISA4Q96DD7 197 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 NRBP1Q9UHY1 535 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 DDX49Q9Y6V7 483 aaKnown RBP10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
HMGN1P31-201ENST00000590085 ASB14A6NK59 587 aa10.76□□□□□ -0.69
HMGN1P31-201ENST00000590085 GCOM1H8Y6P7 765 aaPredicted RBP10.76□□□□□ -0.69
HMGN1P31-201ENST00000590085 MEIS2O14770 477 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms