RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TTLL1O95922 423 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 GPNMBQ14956 572 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 TCTN1Q2MV58 587 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 NBPF20Q3BBV1 942 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 SEZ6LQ9BYH1 1024 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.037e-7■■□□□ 11.5
PRKCSH-210ENST00000589990 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 Q9Y3F1 56 aa15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 TRIP12Q14669 1992 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-210ENST00000589990 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 ACTN1P12814 892 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 MCCP23508 829 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 STAT2P52630 851 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 NSMFQ6X4W1 530 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 ZNF444Q8N0Y2 327 aaPredicted RBP15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 PHOSPHO2Q8TCD6 241 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 COPS5Q92905 334 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
PRKCSH-210ENST00000589990 TRIOO75962 3097 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 M0R2C6 588 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 SUPT20HL2P0C7V6 817 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 IL9P15248 144 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 DEFB103AP81534 67 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 IKQ13123 557 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 STAG1Q8WVM7 1258 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 ANKS1AQ92625 1134 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
PRKCSH-210ENST00000589990 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.02
PRKCSH-210ENST00000589990 WDR5P61964 334 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 TSHZ3Q63HK5 1081 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 OR6J1Q8NGC5 347 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 MTMR7Q9Y216 660 aa15.2■□□□□ 0.02
PRKCSH-210ENST00000589990 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 NFIBO00712 420 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 GPAA1O43292 621 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 NMT2O60551 498 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 FDX1P10109 184 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 RFC2P35250 354 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 SLC1A4P43007 532 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 TDO2P48775 406 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 MRE11P49959 708 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 ALDH5A1P51649 535 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 CHMP4BP1P59074 171 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 TFAP4Q01664 338 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 ZSCAN25Q6NSZ9 544 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 GIMAP6Q6P9H5 292 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 FAM160B2Q86V87 743 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 FAM178BQ8IXR5 827 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 CHURC1Q8WUH1 139 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 UBE2ZQ9H832 354 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 SYNPO2Q9UMS6 1093 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
PRKCSH-210ENST00000589990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 PRR33A8MZF0 331 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 KCNA5P22460 613 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 GJD3Q8N144 294 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 SEC62Q99442 399 aaKnown RBP15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 IL17RBQ9NRM6 502 aa15.18■□□□□ 0.02
PRKCSH-210ENST00000589990 SIP14410 1827 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 ARIH2O95376 493 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 APPP05067 770 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 SLC16A2P36021 539 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 CPT1AP50416 773 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 IFNL3Q8IZI9 196 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 APPBP2Q92624 585 aa15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
PRKCSH-210ENST00000589990 BAIAP3O94812 1187 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 KCNJ6P48051 423 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 LEXMQ3ZCV2 418 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 RCSD1Q6JBY9 416 aa15.16■□□□□ 0.02
PRKCSH-210ENST00000589990 GDF6Q6KF10 455 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms