RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 FAM161BQ96MY7 647 aa22.59■■□□□ 1.21
PTBP1-215ENST00000589883 GUCD1Q96NT3 240 aa22.59■■□□□ 1.21
PTBP1-215ENST00000589883 UPF3BQ9BZI7 483 aaKnown RBP22.59■■□□□ 1.21
PTBP1-215ENST00000589883 UPF2Q9HAU5 1272 aaKnown RBP22.59■■□□□ 1.21
PTBP1-215ENST00000589883 HOMER2Q9NSB8 354 aa22.59■■□□□ 1.21
PTBP1-215ENST00000589883 ASB14A6NK59 587 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 FGD1P98174 961 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 CCDC174Q6PII3 467 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 NFXL1Q6ZNB6 911 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 KCTD1Q719H9 257 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 MTA3Q9BTC8 594 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 C22orf23Q9BZE7 217 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 ZSWIM6Q9HCJ5 1215 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 RNF146Q9NTX7 359 aa22.58■■□□□ 1.21
PTBP1-215ENST00000589883 LAMA2P24043 3122 aaKnown RBP22.58■■□□□ 1.21
PTBP1-215ENST00000589883 A0A0C4DFX4 3053 aa22.58■■□□□ 1.2
PTBP1-215ENST00000589883 FRMPD2Q68DX3 1309 aaPredicted RBP22.57■■□□□ 1.2
PTBP1-215ENST00000589883 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 PDHBP11177 359 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 GJA9P57773 515 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 FAAP100Q0VG06 881 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 GNASQ5JWF2 1037 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 CCSAPQ6IQ19 270 aaPredicted RBP22.57■■□□□ 1.2
PTBP1-215ENST00000589883 RUFY3Q7L099 469 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 CCDC144CPQ8IYA2 1237 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 DCAF4Q8WV16 495 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 TM6SF1Q9BZW5 370 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 UPF3AQ9H1J1 476 aaKnown RBP22.57■■□□□ 1.2
PTBP1-215ENST00000589883 CYP46A1Q9Y6A2 500 aa22.57■■□□□ 1.2
PTBP1-215ENST00000589883 MCM3APO60318 1980 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 TMEM265A0A087WTH1 108 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 ASGR1P07306 291 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 Q6ZUG5 572 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 FAM133AQ8N9E0 248 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 TRERF1Q96PN7 1200 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 MYL10Q9BUA6 226 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 SEMA6BQ9H3T3 888 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 GPCPD1Q9NPB8 672 aa22.56■■□□□ 1.2
PTBP1-215ENST00000589883 A0A0U1RQG5 324 aaPredicted RBP22.55■■□□□ 1.2
PTBP1-215ENST00000589883 CCDC69A6NI79 296 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 TLR3O15455 904 aaKnown RBP22.55■■□□□ 1.2
PTBP1-215ENST00000589883 TIMP1P01033 207 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 ITGB8P26012 769 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 LIFRP42702 1097 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 NOL8Q76FK4 1167 aaKnown RBP22.55■■□□□ 1.2
PTBP1-215ENST00000589883 CATIPQ7Z7H3 387 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 FGD4Q96M96 766 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 AGBL1Q96MI9 1066 aa22.55■■□□□ 1.2
PTBP1-215ENST00000589883 A1CFQ9NQ94 594 aaKnown RBP22.55■■□□□ 1.2
PTBP1-215ENST00000589883 GOLGA8HP0CJ92 632 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 SNHG28P0DPA3 235 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 ALAS1P13196 640 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 CNTN2Q02246 1040 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 TNFAIP2Q03169 654 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 ZNF543Q08ER8 600 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 TTBK2Q6IQ55 1244 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 RAB11FIP4Q86YS3 637 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 ZNF654Q8IZM8 581 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 TMTC2Q8N394 836 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 CDX2Q99626 313 aaPredicted RBP22.54■■□□□ 1.2
PTBP1-215ENST00000589883 ZNF536O15090 1300 aa22.54■■□□□ 1.2
PTBP1-215ENST00000589883 MYADML2A6NDP7 307 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 ARVCFO00192 962 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 ZEB2O60315 1214 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 CABYRO75952 493 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 NKX3-2P78367 333 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 PPIGQ13427 754 aaKnown RBP eCLIP22.53■■□□□ 1.21e-11■□□□□ 10.7
PTBP1-215ENST00000589883 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.53■■□□□ 1.29e-10■□□□□ 8.5
PTBP1-215ENST00000589883 TBX21Q9UL17 535 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 PRR12Q9ULL5 1215 aa22.53■■□□□ 1.2
PTBP1-215ENST00000589883 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.52■■□□□ 1.2
PTBP1-215ENST00000589883 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.52■■□□□ 1.2
PTBP1-215ENST00000589883 PARP1P09874 1014 aaKnown RBP22.52■■□□□ 1.2
PTBP1-215ENST00000589883 SLC16A2P36021 539 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
PTBP1-215ENST00000589883 CDK7P50613 346 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 MFSD5Q6N075 450 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 BRF1Q92994 677 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 IL17RAQ96F46 866 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 SEZ6LQ9BYH1 1024 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 KATNBL1Q9H079 304 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 AP5M1Q9H0R1 490 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 PDRG1Q9NUG6 133 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 PNMA2Q9UL42 364 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
PTBP1-215ENST00000589883 SLC12A7Q9Y666 1083 aa22.52■■□□□ 1.2
PTBP1-215ENST00000589883 CUL9Q8IWT3 2517 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 RXRAP19793 462 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 EPHB4P54760 987 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 APOBRQ0VD83 1088 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 TROAPQ12815 778 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 SGMS1Q86VZ5 419 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 TMEM199Q8N511 208 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 CPVLQ9H3G5 476 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 BRPF3Q9ULD4 1205 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 CCPG1Q9ULG6 757 aa22.51■■□□□ 1.19
PTBP1-215ENST00000589883 KLF18A0A0U1RQI7 1052 aa22.5■■□□□ 1.19
PTBP1-215ENST00000589883 ADCY6O43306 1168 aa22.5■■□□□ 1.19
PTBP1-215ENST00000589883 DDAH1O94760 285 aa22.5■■□□□ 1.19
PTBP1-215ENST00000589883 ICAM1P05362 532 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms