RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
ATG4D-211ENST00000589753 PLEKHH3Q7Z736 793 aa17.42■□□□□ 0.38
ATG4D-211ENST00000589753 BLIDQ8IZY5 108 aa17.42■□□□□ 0.38
ATG4D-211ENST00000589753 DAGLBQ8NCG7 672 aa17.42■□□□□ 0.38
ATG4D-211ENST00000589753 TBC1D5Q92609 795 aa17.42■□□□□ 0.38
ATG4D-211ENST00000589753 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
ATG4D-211ENST00000589753 PFASO15067 1338 aa17.42■□□□□ 0.38
ATG4D-211ENST00000589753 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 PIK3CDO00329 1044 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 MEIS2O14770 477 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 TNPO2O14787 897 aaKnown RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 PDIA4P13667 645 aaKnown RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 HOXA13P31271 388 aaPredicted RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 KRT2P35908 639 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 FCGRTP55899 365 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 BAATQ14032 418 aaPredicted RBP17.41■□□□□ 0.38
ATG4D-211ENST00000589753 NPY5RQ15761 445 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 UBE2SQ16763 222 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 USP17L6PQ6QN14 398 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 CYP39A1Q9NYL5 469 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 TSKSQ9UJT2 592 aa17.41■□□□□ 0.38
ATG4D-211ENST00000589753 STX6O43752 255 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 FKTNO75072 461 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 PTPREP23469 700 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 PSMC4P43686 418 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 SLC30A10Q6XR72 485 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
ATG4D-211ENST00000589753 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
ATG4D-211ENST00000589753 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
ATG4D-211ENST00000589753 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
ATG4D-211ENST00000589753 SLC15A5A6NIM6 579 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 CTGFP29279 349 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
ATG4D-211ENST00000589753 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
ATG4D-211ENST00000589753 GRB14Q14449 540 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 MCTP2Q6DN12 878 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
ATG4D-211ENST00000589753 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
ATG4D-211ENST00000589753 ARHGAP39Q9C0H5 1083 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 PCDHA6Q9UN73 950 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 PCDHA8Q9Y5H6 950 aa17.39■□□□□ 0.37
ATG4D-211ENST00000589753 MGAMO43451 1857 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 SPDYE3A6NKU9 549 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 M0R2N6 131 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 ADORA2AP29274 412 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 AP3B2Q13367 1082 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 JAKMIP3Q5VZ66 844 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 MCTP1Q6DN14 999 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 CD99L2Q8TCZ2 262 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 TRIM47Q96LD4 638 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
ATG4D-211ENST00000589753 COL20A1Q9P218 1284 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
ATG4D-211ENST00000589753 DNAJC25-GNG10A0A024R161 153 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 FOSP01100 380 aaPredicted RBP17.37■□□□□ 0.37
ATG4D-211ENST00000589753 PGK2P07205 417 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 DDIT3P35638 169 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 NR5A1Q13285 461 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 MORN1Q5T089 497 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 KRT25Q7Z3Z0 450 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 TAAR1Q96RJ0 339 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 ZNF236Q9UL36 1845 aa17.37■□□□□ 0.37
ATG4D-211ENST00000589753 ZSWIM8A7E2V4 1837 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
ATG4D-211ENST00000589753 CNTN2Q02246 1040 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 PKP1Q13835 747 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 ARHGEF6Q15052 776 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 DPP9Q86TI2 863 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 FAM133AQ8N9E0 248 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 PGBD1Q96JS3 809 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 PURBQ96QR8 312 aaKnown RBP17.36■□□□□ 0.37
ATG4D-211ENST00000589753 ANO3Q9BYT9 981 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 EHMT1Q9H9B1 1298 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 SLC5A4Q9NY91 659 aa17.36■□□□□ 0.37
ATG4D-211ENST00000589753 COBLO75128 1261 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 GNRH1P01148 92 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
ATG4D-211ENST00000589753 CAP1Q01518 475 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 MAP2K5Q13163 448 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 ZNF792Q3KQV3 632 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 DNERQ8NFT8 737 aa17.35■□□□□ 0.37
ATG4D-211ENST00000589753 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
ATG4D-211ENST00000589753 RMDN3Q96TC7 470 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms