RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CXCR5P32302 372 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 ELF1P32519 619 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 ADAT2Q7Z6V5 191 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 LPIN2Q92539 896 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 ZMYND12Q9H0C1 365 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 OR52Z1P0C646 297 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 IP6K1Q92551 441 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.145e-7■■□□□ 13
SMARCA4-214ENST00000589677 SPECC1L-ADORA2AF8WAN1 911 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 LAD1O00515 517 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 FGAP02671 866 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 EIF4A1P60842 406 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 NAA35Q5VZE5 725 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 MPHOSPH6Q99547 160 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 PRDM1O75626 825 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 PICALMQ13492 652 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 DTNBP1Q96EV8 351 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 DRC3Q9H069 523 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 RASSF10A6NK89 507 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 FMNL1O95466 1100 aaPredicted RBP15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 MMEP08473 750 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 RASA3Q14644 834 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 ST7Q9NRC1 585 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 FGFR1OP2Q9NVK5 253 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 MGEA5O60502 916 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 PPARAQ07869 468 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 DPH6Q7L8W6 267 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 PGBD1Q96JS3 809 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 EIF4A3P38919 411 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 PTPROQ16827 1216 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
SMARCA4-214ENST00000589677 hCG_1642624A0A1W2PR95 340 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 CHGBP05060 677 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 MYO1EQ12965 1108 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 ADAM9Q13443 819 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 PRR16Q569H4 304 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 SPATA5Q8NB90 893 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 VTI1AQ96AJ9 217 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 ZNF594Q96JF6 807 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 SLC39A2Q9NP94 309 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 PANK4Q9NVE7 773 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 ZSCAN10Q96SZ4 725 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 SCINQ9Y6U3 715 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 MYO5CQ9NQX4 1742 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 IFNB1P01574 187 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 SCG2P13521 617 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 VPS41P49754 854 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 EXOC3L4Q17RC7 722 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 SRPRBQ9Y5M8 271 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 CFAP74Q9C0B2 1584 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 NEURL1BA8MQ27 555 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 KIF11P52732 1056 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 PPP2R2AP63151 447 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 TCP11X2Q5H9J9 407 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 GPBP1Q86WP2 473 aa15.93■□□□□ 0.14
SMARCA4-214ENST00000589677 ECEL1O95672 775 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 FTCDO95954 541 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 SERPING1P05155 500 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 DHX40Q8IX18 779 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 MB21D1Q8N884 522 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 NUGGCQ68CJ6 796 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 GPCPD1Q9NPB8 672 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 ADGRG1Q9Y653 693 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 POC1B-GALNT4F8VUJ3 575 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 DDAH1O94760 285 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 CORO7P57737 925 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 PHEXP78562 749 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 KRT31Q15323 416 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 FAM26FQ5R3K3 315 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 IFNL3Q8IZI9 196 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 ATP6V1G3Q96LB4 118 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 ABHD10Q9NUJ1 306 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 NIP7Q9Y221 180 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 GOLGA8QA0A0J9YX86 632 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 GOLGA8OA6NCC3 632 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 GOLGA8NF8WBI6 632 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 TEX2Q8IWB9 1127 aa15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 SMYD4Q8IYR2 804 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-214ENST00000589677 KCNA6P17658 529 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 HSPA2P54652 639 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 DEUP1Q05D60 604 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 AK8Q96MA6 479 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 RNF26Q9BY78 433 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 SMCO2A6NFE2 343 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 TECP42680 631 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 RESP18Q5W5W9 173 aa15.91■□□□□ 0.14
SMARCA4-214ENST00000589677 CASC4Q6P4E1 433 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms