RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 IQCF3P0C7M6 154 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 PSMC6P62333 389 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
TREM1-204ENST00000589614 AP5M1Q9H0R1 490 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 GPR108Q9NPR9 543 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
TREM1-204ENST00000589614 TRMT13Q9NUP7 481 aaKnown RBP11.44□□□□□ -0.58
TREM1-204ENST00000589614 FBXO40Q9UH90 709 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 RIPK3Q9Y572 518 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 DMXL1Q9Y485 3027 aa11.44□□□□□ -0.58
TREM1-204ENST00000589614 LINC01553A4QN01 128 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 GJB5O95377 273 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 ZAP70P43403 619 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 WDR5P61964 334 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 LRRFIP1Q32MZ4 808 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 CLEC10AQ8IUN9 316 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 SUGP1Q8IWZ8 645 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 RAD9AQ99638 391 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 RIOK1Q9BRS2 568 aaKnown RBP11.43□□□□□ -0.58
TREM1-204ENST00000589614 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
TREM1-204ENST00000589614 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 MUTYHQ9UIF7 546 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 MTUS1Q9ULD2 1270 aa11.43□□□□□ -0.58
TREM1-204ENST00000589614 IDH1O75874 414 aaKnown RBP11.42□□□□□ -0.58
TREM1-204ENST00000589614 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
TREM1-204ENST00000589614 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 RETREG2Q8NC44 543 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 CCDC17Q96LX7 622 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 SLF1Q9BQI6 1058 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 ALG13Q9NP73 1137 aaKnown RBP11.42□□□□□ -0.58
TREM1-204ENST00000589614 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 MCM9Q9NXL9 1143 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 ZFHX4Q86UP3 3567 aa11.42□□□□□ -0.58
TREM1-204ENST00000589614 NCOR2Q9Y618 2525 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 DYNC1LI2O43237 492 aaPredicted RBP11.41□□□□□ -0.58
TREM1-204ENST00000589614 AKR1B1P15121 316 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 SMPD1P17405 629 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 CLCN6P51797 869 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 G3BP1Q13283 466 aaKnown RBP eCLIP11.41□□□□□ -0.58
TREM1-204ENST00000589614 BFSP2Q13515 415 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 SMAD2Q15796 467 aaKnown RBP11.41□□□□□ -0.58
TREM1-204ENST00000589614 PTPROQ16827 1216 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 RNF135Q8IUD6 432 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 FBXL6Q8N531 539 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 PRPF38AQ8NAV1 312 aaKnown RBP11.41□□□□□ -0.58
TREM1-204ENST00000589614 CHST13Q8NET6 341 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.41□□□□□ -0.58
TREM1-204ENST00000589614 MEIS3Q99687 375 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 DBNDD2Q9BQY9 259 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 KANSL2Q9H9L4 492 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 MICAL3Q7RTP6 2002 aa11.41□□□□□ -0.58
TREM1-204ENST00000589614 BAZ2AQ9UIF9 1905 aaKnown RBP11.41□□□□□ -0.58
TREM1-204ENST00000589614 ACACBO00763 2458 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 TMEM221A6NGB7 291 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 ASB14A6NK59 587 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 M0R296 226 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 NCK2O43639 380 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
TREM1-204ENST00000589614 EVX2Q03828 476 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 TNNI3KQ59H18 835 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 BANK1Q8NDB2 785 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
TREM1-204ENST00000589614 FAM86C1Q9NVL1 165 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 FPGT-TNNI3KV9GXZ4 949 aa11.4□□□□□ -0.58
TREM1-204ENST00000589614 GREB1LQ9C091 1923 aaPredicted RBP11.4□□□□□ -0.58
TREM1-204ENST00000589614 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
TREM1-204ENST00000589614 EFCAB14O75071 495 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 ZBED4O75132 1171 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 PARNO95453 639 aaKnown RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 GNAI3P08754 354 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 ID4P47928 161 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 OAZ1P54368 228 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 DEFB103AP81534 67 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 PURAQ00577 322 aaKnown RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 PTPN11Q06124 597 aaPredicted RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 CPXCR1Q8N123 301 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 AFAP1L1Q8TED9 768 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
TREM1-204ENST00000589614 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 EP300Q09472 2414 aaPredicted RBP11.39□□□□□ -0.59
TREM1-204ENST00000589614 ATG2AQ2TAZ0 1938 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms