RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 ATP11BQ9Y2G3 1177 aa22.36■■□□□ 1.17
CIRBP-221ENST00000589161 A0A1W2PQ45 241 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-221ENST00000589161 A0A1W2PQY0 241 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 ZBTB5O15062 677 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 ADCY6O43306 1168 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 CCSAPQ6IQ19 270 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-221ENST00000589161 TAPT1Q6NXT6 567 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 FBXO16Q8IX29 292 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-221ENST00000589161 GDF15Q99988 308 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 RIOX1Q9H6W3 641 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 PRKAG2Q9UGJ0 569 aa22.35■■□□□ 1.17
CIRBP-221ENST00000589161 DDX49Q9Y6V7 483 aaKnown RBP22.35■■□□□ 1.17
CIRBP-221ENST00000589161 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.34■■□□□ 1.17
CIRBP-221ENST00000589161 A0A1W2PPC1 479 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 BMP8BP34820 402 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 NKX3-2P78367 333 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 PDE4DQ08499 809 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 GNASQ5JWF2 1037 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 ERICH6BQ5W0A0 696 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 AP5M1Q9H0R1 490 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 PDGFCQ9NRA1 345 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 GNEQ9Y223 722 aaKnown RBP22.34■■□□□ 1.17
CIRBP-221ENST00000589161 Q9Y3F1 56 aa22.34■■□□□ 1.17
CIRBP-221ENST00000589161 MYADML2A6NDP7 307 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 CCDC69A6NI79 296 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 DDAH1O94760 285 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 SMPD1P17405 629 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 KIF5BP33176 963 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 LIFRP42702 1097 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 TRIM60Q495X7 471 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 ZNF654Q8IZM8 581 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 CTCFLQ8NI51 663 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-221ENST00000589161 STARD7Q9NQZ5 370 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.17
CIRBP-221ENST00000589161 SH2B2O14492 632 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-221ENST00000589161 ASGR1P07306 291 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 EDNRBP24530 442 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 MAGEA10P43363 369 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-221ENST00000589161 TSGA10IPQ3SY00 556 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 TLK2Q86UE8 772 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 SYTL5Q8TDW5 730 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-221ENST00000589161 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 GLT1D1Q96MS3 346 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 GPHNQ9NQX3 736 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-221ENST00000589161 MAP3K20Q9NYL2 800 aaKnown RBP22.32■■□□□ 1.16
CIRBP-221ENST00000589161 MCM3APO60318 1980 aa22.32■■□□□ 1.16
CIRBP-221ENST00000589161 ELP1O95163 1332 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 PNMA6FA0A0J9YX94 578 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 RBM47A0AV96 593 aaKnown RBP22.31■■□□□ 1.16
CIRBP-221ENST00000589161 DYNC1LI2O43237 492 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-221ENST00000589161 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-221ENST00000589161 CALM1P0DP23 149 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 CALM2P0DP24 149 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 CALM3P0DP25 149 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 DUSP28Q4G0W2 176 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 HOMER1Q86YM7 354 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 NSUN6Q8TEA1 469 aaKnown RBP22.31■■□□□ 1.16
CIRBP-221ENST00000589161 NEK1Q96PY6 1258 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 PIGSQ96S52 555 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 LZTS2Q9BRK4 669 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 WDR11Q9BZH6 1224 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
CIRBP-221ENST00000589161 CTAGE5O15320 804 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 CYTH3O43739 400 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 ZEB2O60315 1214 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 PPP1R11O60927 126 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-221ENST00000589161 SLC34A2O95436 690 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 SMARCA1P28370 1054 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 GNAQP50148 359 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 IRX5P78411 483 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-221ENST00000589161 TLE2Q04725 743 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 KRT32Q14532 448 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 SLC35G1Q2M3R5 365 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 VTI1AQ96AJ9 217 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 TAAR1Q96RJ0 339 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 IWS1Q96ST2 819 aa22.3■■□□□ 1.16
CIRBP-221ENST00000589161 LBHD1Q9BQE6 289 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-221ENST00000589161 CFBP00751 764 aa22.29■■□□□ 1.16
CIRBP-221ENST00000589161 FSCN1Q16658 493 aaKnown RBP22.29■■□□□ 1.16
CIRBP-221ENST00000589161 RMDN3Q96TC7 470 aa22.29■■□□□ 1.16
CIRBP-221ENST00000589161 MYL10Q9BUA6 226 aa22.29■■□□□ 1.16
CIRBP-221ENST00000589161 SLC12A7Q9Y666 1083 aa22.29■■□□□ 1.16
CIRBP-221ENST00000589161 NKRFO15226 690 aaKnown RBP eCLIP22.28■■□□□ 1.16
CIRBP-221ENST00000589161 CABYRO75952 493 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 FXR1P51114 621 aaKnown RBP eCLIP22.28■■□□□ 1.16
CIRBP-221ENST00000589161 HSD17B4P51659 736 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 BEX3Q00994 111 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 GHRHRQ02643 423 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 ARHGEF16Q5VV41 709 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 SCFD2Q8WU76 684 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 TOX2Q96NM4 488 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 SPZ1Q9BXG8 430 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 UBE2OQ9C0C9 1292 aaKnown RBP22.28■■□□□ 1.16
CIRBP-221ENST00000589161 PRDM5Q9NQX1 630 aaPredicted RBP22.28■■□□□ 1.16
CIRBP-221ENST00000589161 COL20A1Q9P218 1284 aa22.28■■□□□ 1.16
CIRBP-221ENST00000589161 LCTP09848 1927 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 A0A0U1RQG5 324 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-221ENST00000589161 DCDC2CA8MYV0 355 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms