RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
NPC1-207ENST00000588867 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 ANO1Q5XXA6 986 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 TBCKQ8TEA7 893 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 SPATA32Q96LK8 384 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 SCAND2PQ9GZW5 306 aaPredicted RBP16.56■□□□□ 0.24
NPC1-207ENST00000588867 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 PCDHB6Q9Y5E3 794 aa16.56■□□□□ 0.24
NPC1-207ENST00000588867 PIK3CDO00329 1044 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
NPC1-207ENST00000588867 CNMDO75829 334 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 INHBEP58166 350 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 NSMFQ6X4W1 530 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.246e-6■■□□□ 14
NPC1-207ENST00000588867 STK38Q15208 465 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 ZNF174Q15697 407 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 Q3C1V9 767 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 ZIC5Q96T25 663 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
NPC1-207ENST00000588867 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
NPC1-207ENST00000588867 FOSP01100 380 aaPredicted RBP16.54■□□□□ 0.24
NPC1-207ENST00000588867 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 RNF207Q6ZRF8 634 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 RIOX2Q8IUF8 465 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
NPC1-207ENST00000588867 LEO1Q8WVC0 666 aaPredicted RBP16.54■□□□□ 0.24
NPC1-207ENST00000588867 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
NPC1-207ENST00000588867 ANO3Q9BYT9 981 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 ACAD9Q9H845 621 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
NPC1-207ENST00000588867 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 WNT7AO00755 349 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 NEK8Q86SG6 692 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 MCM7P33993 719 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
NPC1-207ENST00000588867 HSD17B4P51659 736 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 RPS6P62753 249 aaKnown RBP16.53■□□□□ 0.24
NPC1-207ENST00000588867 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 ERVK-24P63145 666 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 BAATQ14032 418 aaPredicted RBP16.53■□□□□ 0.24
NPC1-207ENST00000588867 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 GPRC5AQ8NFJ5 357 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 CAPNS2Q96L46 248 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
NPC1-207ENST00000588867 RASSF10A6NK89 507 aa16.52■□□□□ 0.24
NPC1-207ENST00000588867 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
NPC1-207ENST00000588867 CCNT1O60563 726 aaKnown RBP16.52■□□□□ 0.24
NPC1-207ENST00000588867 NASPP49321 788 aaPredicted RBP16.52■□□□□ 0.24
NPC1-207ENST00000588867 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
NPC1-207ENST00000588867 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
NPC1-207ENST00000588867 TEX2Q8IWB9 1127 aa16.52■□□□□ 0.24
NPC1-207ENST00000588867 LINC00301Q8NCQ3 95 aa16.52■□□□□ 0.24
NPC1-207ENST00000588867 MAP3K20Q9NYL2 800 aaKnown RBP16.52■□□□□ 0.24
NPC1-207ENST00000588867 SPTLC2O15270 562 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 AOC2O75106 756 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 YEATS4O95619 227 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 SLC25A27O95847 323 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 ERCC3P19447 782 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 NOGQ13253 232 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.52■□□□□ 0.23
NPC1-207ENST00000588867 FBXO40Q9UH90 709 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 CEP131Q9UPN4 1083 aa16.52■□□□□ 0.23
NPC1-207ENST00000588867 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
NPC1-207ENST00000588867 ME1P48163 572 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 TM4SF4P48230 202 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 UBXN2AP68543 259 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 SLC39A14Q15043 492 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 CCAR1Q8IX12 1150 aaKnown RBP16.51■□□□□ 0.23
NPC1-207ENST00000588867 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
NPC1-207ENST00000588867 EHMT1Q9H9B1 1298 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
NPC1-207ENST00000588867 LMBRD1Q9NUN5 540 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
NPC1-207ENST00000588867 CCNA1P78396 465 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 HTRA3P83110 453 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 ARHGAP4P98171 946 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 PTPAQ15257 358 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
NPC1-207ENST00000588867 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 A1CFQ9NQ94 594 aaKnown RBP16.5■□□□□ 0.23
NPC1-207ENST00000588867 MYH7BA7E2Y1 1941 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 COPB2P35606 906 aa16.5■□□□□ 0.23
NPC1-207ENST00000588867 GHRHRQ02643 423 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms