RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 TSPY1Q01534 308 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 GLE1Q53GS7 698 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 GDAP1Q8TB36 358 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 BRF1Q92994 677 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 ZMAT5Q9UDW3 170 aaKnown RBP8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TCEAL9Q9UHQ7 104 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
LAMA3-210ENST00000588770 PTPN23Q9H3S7 1636 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 NVLO15381 856 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 LDHBP07195 334 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SCG2P13521 617 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 C8orf74Q6P047 294 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 VSIG1Q86XK7 387 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 DHX40Q8IX18 779 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SUN5Q8TC36 379 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 NACC2Q96BF6 587 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 COQ7Q99807 217 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 PLVAPQ9BX97 442 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 CUX1P39880 1505 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 KIF22Q14807 665 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ARHGEF6Q15052 776 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 NUDCD1Q96RS6 583 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 GIMAP4Q9NUV9 329 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ATAD3AQ9NVI7 634 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 CAMSAP2Q08AD1 1489 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 KDRP35968 1356 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ATP6V1C1P21283 382 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 PDE4BQ07343 736 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SGSM1Q2NKQ1 1148 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SYT2Q8N9I0 419 aaPredicted RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 AS3MTQ9HBK9 375 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ZNF304Q9HCX3 659 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 PANK4Q9NVE7 773 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 THEGQ9P2T0 379 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SEC63Q9UGP8 760 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SAP30BPQ9UHR5 308 aaKnown RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 IVNS1ABPQ9Y6Y0 642 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 A0A087WWV3 80 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 SPTLC1O15269 473 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 WASHC5Q12768 1159 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 CCNI2Q6ZMN8 369 aaPredicted RBP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 HS2ST1Q7LGA3 356 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ARL8AQ96BM9 186 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ATP6V1G3Q96LB4 118 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 NEK1Q96PY6 1258 aa8.5□□□□□ -1.05
LAMA3-210ENST00000588770 DDX21Q9NR30 783 aaKnown RBP eCLIP8.5□□□□□ -1.05
LAMA3-210ENST00000588770 ANKRD50Q9ULJ7 1429 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 HIP1O00291 1037 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 IGF2BP3O00425 579 aaKnown RBP eCLIP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 DNM1LO00429 736 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SLC27A2O14975 620 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 TRPA1O75762 1119 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SERPINI2O75830 405 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 CCDC159P0C7I6 412 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 EIF2B2P49770 351 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 EIF4A2Q14240 407 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 CHCHD4Q8N4Q1 142 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 LRRC8CQ8TDW0 803 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SNX27Q96L92 541 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SLX1AQ9BQ83 275 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 DDX25Q9UHL0 483 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 MOSPD1Q9UJG1 213 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 GRIN2DO15399 1336 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 SYNJ1O43426 1573 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 GOLGA8CPA6NN73 597 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 CTNND1O60716 968 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 DDX5P17844 614 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 PRR16Q569H4 304 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 EMC10Q5UCC4 262 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 C1orf228Q6PIY5 440 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 PATL1Q86TB9 770 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 ARHGEF2Q92974 986 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 RTL1A6NKG5 1358 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 UNCXA6NJT0 531 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 MCF2LO15068 1137 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 BIRC5O15392 142 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 MRPS25P82663 173 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 BNIP1Q12981 228 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 KPNB1Q14974 876 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 R3HDM1Q15032 1099 aaKnown RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 CYTH1Q15438 398 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 PTF1AQ7RTS3 328 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 VSTM4Q8IW00 320 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 STMN4Q9H169 189 aaPredicted RBP8.49□□□□□ -1.05
LAMA3-210ENST00000588770 GOLPH3LQ9H4A5 285 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 ALDH1L1O75891 902 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 ACADSP16219 412 aa8.49□□□□□ -1.05
LAMA3-210ENST00000588770 NLRP12P59046 1061 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms