RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ASB14A6NK59 587 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 NFIBO00712 420 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 ADCY3O60266 1144 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 CFBP00751 764 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 FOSP01100 380 aaPredicted RBP10.43□□□□□ -0.74
CIRBP-218ENST00000588344 CAPN2P17655 700 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 CYP2B6P20813 491 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 CALML3P27482 149 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 HSD17B4P51659 736 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 NAPAP54920 295 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 RPS6P62753 249 aaKnown RBP10.43□□□□□ -0.74
CIRBP-218ENST00000588344 PKN1Q16512 942 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 MFSD14CQ5VZR4 134 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 NSUN7Q8NE18 718 aaKnown RBP10.43□□□□□ -0.74
CIRBP-218ENST00000588344 IWS1Q96ST2 819 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 C6orf50Q9HD87 102 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 RIC8AQ9NPQ8 531 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 NRBP1Q9UHY1 535 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 GABRQQ9UN88 632 aa10.43□□□□□ -0.74
CIRBP-218ENST00000588344 hCG_1642624A0A1W2PR95 340 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 SMCO2A6NFE2 343 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 K7ELQ4 463 aaPredicted RBP10.42□□□□□ -0.74
CIRBP-218ENST00000588344 STXBP3O00186 592 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 COBLO75128 1261 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 LARGE1O95461 756 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 GRK4P32298 578 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 UBXN2AP68543 259 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 TRIM29Q14134 588 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 WWC2Q6AWC2 1192 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 MAMDC4Q6UXC1 1216 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 CCDC83Q8IWF9 413 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 FAM184AQ8NB25 1140 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
CIRBP-218ENST00000588344 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
CIRBP-218ENST00000588344 MAML3Q96JK9 1138 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 ZMYND12Q9H0C1 365 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 EHMT1Q9H9B1 1298 aa10.42□□□□□ -0.74
CIRBP-218ENST00000588344 SYNGAP1Q96PV0 1343 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 OPLAHO14841 1288 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
CIRBP-218ENST00000588344 CTDNEP1O95476 244 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 HMGCRP04035 888 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 PGK2P07205 417 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
CIRBP-218ENST00000588344 ADCY7P51828 1080 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 NLRP5P59047 1200 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 CAP1Q01518 475 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 AP3B2Q13367 1082 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 CUL4AQ13619 759 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 SLC9C1Q4G0N8 1177 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 XRRA1Q6P2D8 792 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 SYTL5Q8TDW5 730 aaPredicted RBP10.41□□□□□ -0.74
CIRBP-218ENST00000588344 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 BIN2Q9UBW5 565 aaPredicted RBP10.41□□□□□ -0.74
CIRBP-218ENST00000588344 PTCH2Q9Y6C5 1203 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 RLFQ13129 1914 aa10.41□□□□□ -0.74
CIRBP-218ENST00000588344 SPDYE3A6NKU9 549 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 MEIS2O14770 477 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 STAM2O75886 525 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
CIRBP-218ENST00000588344 SAFBQ15424 915 aaKnown RBP eCLIP10.4□□□□□ -0.74
CIRBP-218ENST00000588344 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 NPLOC4Q8TAT6 608 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 MORC4Q8TE76 937 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.74
CIRBP-218ENST00000588344 ALG1Q9BT22 464 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 ABHD16BQ9H3Z7 469 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 BRMS1Q9HCU9 246 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 CNPY2Q9Y2B0 182 aa10.4□□□□□ -0.74
CIRBP-218ENST00000588344 A0A0G2JMZ2 1700 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 EIF3JO75822 258 aaKnown RBP10.39□□□□□ -0.75
CIRBP-218ENST00000588344 IGHA2P01877 340 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
CIRBP-218ENST00000588344 PDCP20941 246 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 ALDH5A1P51649 535 aaPredicted RBP10.39□□□□□ -0.75
CIRBP-218ENST00000588344 CNTN2Q02246 1040 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 PDE4DQ08499 809 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 BECN1Q14457 450 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 STXBP2Q15833 593 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 SLC30A10Q6XR72 485 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 REXO1Q8N1G1 1221 aaKnown RBP10.39□□□□□ -0.75
CIRBP-218ENST00000588344 DAGLBQ8NCG7 672 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 TBC1D5Q92609 795 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 PHF20Q9BVI0 1012 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 MCOLN1Q9GZU1 580 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 PXMP2Q9NR77 195 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 VPS54Q9P1Q0 977 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
CIRBP-218ENST00000588344 RPTORQ8N122 1335 aa10.38□□□□□ -0.75
CIRBP-218ENST00000588344 MSCO60682 206 aa10.38□□□□□ -0.75
CIRBP-218ENST00000588344 HSP90AA1P07900 732 aaKnown RBP10.38□□□□□ -0.75
CIRBP-218ENST00000588344 EDNRBP24530 442 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms