RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TTLL4Q14679 1199 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 CCPG1Q9ULG6 757 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 PTPRSQ13332 1948 aa16.35■□□□□ 0.21
CLPTM1-208ENST00000588274 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 CYP2C9P11712 490 aa16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 COL9A1P20849 921 aa16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 EDNRBP24530 442 aa16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 BAATQ14032 418 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 PCDHA11Q9Y5I1 949 aa16.34■□□□□ 0.21
CLPTM1-208ENST00000588274 EPOPA6NHQ4 379 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 SLC16A2P36021 539 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 MRPS5P82675 430 aaKnown RBP16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 CTAGE1Q96RT6 745 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 TNKSO95271 1327 aa16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
CLPTM1-208ENST00000588274 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 ZEB2O60315 1214 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 POU3F3P20264 500 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 MX1P20591 662 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 IGFBP4P22692 258 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 LRRFIP1Q32MZ4 808 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 PPP4R3BQ5MIZ7 849 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 PPP2R2DQ66LE6 453 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
CLPTM1-208ENST00000588274 ERC2O15083 957 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 PFKMP08237 780 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 BMP1P13497 986 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 TFF2Q03403 129 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 ALX1Q15699 326 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 PPP1R13LQ8WUF5 828 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 TMEM47Q9BQJ4 181 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 PRRC2BQ5JSZ5 2229 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-208ENST00000588274 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 ARIH2O95376 493 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 CA3P07451 260 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 PDHBP11177 359 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 GPNMBQ14956 572 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 COPS5Q92905 334 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 MTCH2Q9Y6C9 303 aa16.3■□□□□ 0.2
CLPTM1-208ENST00000588274 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 A0A0D9SFI3 127 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 A6NJR5 290 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 RFXAPO00287 272 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 CPT1AP50416 773 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 MTG1Q9BT17 334 aaPredicted RBP16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 ADD3Q9UEY8 706 aaKnown RBP16.29■□□□□ 0.2
CLPTM1-208ENST00000588274 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 SUPT20HL2P0C7V6 817 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 KCNQ1P51787 676 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 RPS6P62753 249 aaKnown RBP16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 KRT40Q6A162 431 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 ZNF589Q86UQ0 364 aaPredicted RBP16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
CLPTM1-208ENST00000588274 LAMA4Q16363 1823 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 LPXNO60711 386 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 FGAP02671 866 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 MYL3P08590 195 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 IQCF3P0C7M6 154 aa16.27■□□□□ 0.2
CLPTM1-208ENST00000588274 TAP1Q03518 808 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms