RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 HMX1Q9NP08 348 aaPredicted RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 MAP3K20Q9NYL2 800 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
SDHDP1-201ENST00000588055 RPTORQ8N122 1335 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 CCL5P13501 91 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 NAPAP54920 295 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
SDHDP1-201ENST00000588055 hCG_1642624A0A1W2PR95 340 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 PFKFB2O60825 505 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 SCG2P13521 617 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 IFNAR1P17181 557 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 CNGA1P29973 690 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 CYP2C19P33261 490 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 GLT8D2Q9H1C3 349 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 FAM217BQ9NTX9 383 aaPredicted RBP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 LIMCH1Q9UPQ0 1083 aa13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
SDHDP1-201ENST00000588055 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 MSCO60682 206 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 DEXIO95424 95 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 ALDH5A1P51649 535 aaPredicted RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 HSD17B4P51659 736 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 PDE4DQ08499 809 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 FUT2Q10981 343 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 PHKBQ93100 1093 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 SMCHD1A6NHR9 2005 aa13.67□□□□□ -0.22
SDHDP1-201ENST00000588055 LCTP09848 1927 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 CYBAP13498 195 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 XBP1P17861 261 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 MCM2P49736 904 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 ADCY7P51828 1080 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 SCRN1Q12765 414 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 TRIM32Q13049 653 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 MTFR1Q15390 333 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 ARHGEF16Q5VV41 709 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 WASF1Q92558 559 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 KIF2CQ99661 725 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
SDHDP1-201ENST00000588055 STK36Q9NRP7 1315 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 SPDYE3A6NKU9 549 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 SEPT4O43236 478 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 GJB1P08034 283 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 AKR1A1P14550 325 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 CAPN2P17655 700 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 SOX10P56693 466 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 GHRHRQ02643 423 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 NTRK3Q16288 839 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 ME3Q16798 604 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 PAK6Q9NQU5 681 aaPredicted RBP13.65□□□□□ -0.22
SDHDP1-201ENST00000588055 BRCA2P51587 3418 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 MCM3APO60318 1980 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 STXBP3O00186 592 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 OPLAHO14841 1288 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 CAPN15O75808 1086 aa13.64□□□□□ -0.23
SDHDP1-201ENST00000588055 RARBP10826 455 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms