RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 CCDC144CPQ8IYA2 1237 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 ANKRD35Q8N283 1001 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 NUP133Q8WUM0 1156 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 TOX2Q96NM4 488 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 NECAB3Q96P71 396 aaPredicted RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 STRBPQ96SI9 672 aaKnown RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 TSEN34Q9BSV6 310 aaKnown RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 GREB1LQ9C091 1923 aaPredicted RBP9.18□□□□□ -0.94
VMP1-204ENST00000587259 MKNK2Q9HBH9 465 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 INCENPQ9NQS7 918 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 HELLSQ9NRZ9 838 aa9.18□□□□□ -0.94
VMP1-204ENST00000587259 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 IGKV6D-41A0A0C4DH26 115 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 MOXD2PA6NHM9 499 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 ARVCFO00192 962 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 DUSP11O75319 330 aaKnown RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 PSMA5P28066 241 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 MCMDC2Q4G0Z9 681 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 MAMDC4Q6UXC1 1216 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 NOL8Q76FK4 1167 aaKnown RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 OTOP2Q7RTS6 562 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 MICALL1Q8N3F8 863 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 PRPF38AQ8NAV1 312 aaKnown RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 GLT1D1Q96MS3 346 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 SEC62Q99442 399 aaKnown RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 TM6SF1Q9BZW5 370 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 KATNBL1Q9H079 304 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 PDGFCQ9NRA1 345 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 ARPP21Q9UBL0 812 aaPredicted RBP9.17□□□□□ -0.94
VMP1-204ENST00000587259 MTMR7Q9Y216 660 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 CHD7Q9P2D1 2997 aa9.17□□□□□ -0.94
VMP1-204ENST00000587259 MYO9BQ13459 2157 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 TMEM265A0A087WTH1 108 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 A0A0U1RQG5 324 aaPredicted RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 TNFRSF10AO00220 468 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 RFXAPO00287 272 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 ZBED4O75132 1171 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 CST5P28325 142 aaPredicted RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 GJA9P57773 515 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 PPIGQ13427 754 aaKnown RBP eCLIP9.16□□□□□ -0.94
VMP1-204ENST00000587259 MUM1L1Q5H9M0 696 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 VWCEQ96DN2 955 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 SCLYQ96I15 445 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 GAS2L1Q99501 681 aaPredicted RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 UPF3AQ9H1J1 476 aaKnown RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 CHMP5Q9NZZ3 219 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
VMP1-204ENST00000587259 REV3LO60673 3130 aa9.16□□□□□ -0.94
VMP1-204ENST00000587259 ZNF536O15090 1300 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 ELP1O95163 1332 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 POTEB3A0JP26 581 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 TMEM232C9JQI7 657 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 DYNC1LI2O43237 492 aaPredicted RBP9.15□□□□□ -0.94
VMP1-204ENST00000587259 GPAA1O43292 621 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 B4GALT4O60513 344 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 NMT2O60551 498 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 CD4P01730 458 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 APPP05067 770 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 SMPD1P17405 629 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 PTMSP20962 102 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 COPB2P35606 906 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 TDO2P48775 406 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 TNFAIP2Q03169 654 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 TFF2Q03403 129 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 SBK1Q52WX2 424 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 SLFN13Q68D06 897 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 KRT40Q6A162 431 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 POTEBQ6S5H4 581 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 KCTD1Q719H9 257 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 FBXO16Q8IX29 292 aaPredicted RBP9.15□□□□□ -0.94
VMP1-204ENST00000587259 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 TMEM199Q8N511 208 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
VMP1-204ENST00000587259 MAP4K1Q92918 833 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 KCNB2Q92953 911 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 WNT8AQ9H1J5 351 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 ABHD16BQ9H3Z7 469 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 HIPK3Q9H422 1215 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 CERS4Q9HA82 394 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.94
VMP1-204ENST00000587259 MTMR4Q9NYA4 1195 aa9.15□□□□□ -0.94
VMP1-204ENST00000587259 MYH4Q9Y623 1939 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
VMP1-204ENST00000587259 ATP2A1O14983 1001 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms