RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 ALDH5A1P51649 535 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 FPGSQ05932 587 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 PDE4DQ08499 809 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.41
ZNF540-205ENST00000587220 CPVLQ9H3G5 476 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
ZNF540-205ENST00000587220 LCTP09848 1927 aa12.46□□□□□ -0.42
ZNF540-205ENST00000587220 ARVCFO00192 962 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 CABYRO75952 493 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 ADGRF4Q8IZF3 695 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
ZNF540-205ENST00000587220 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 GNEQ9Y223 722 aaKnown RBP12.45□□□□□ -0.42
ZNF540-205ENST00000587220 Q9Y3F1 56 aa12.45□□□□□ -0.42
ZNF540-205ENST00000587220 U3KPZ7 1027 aaPredicted RBP12.45□□□□□ -0.42
ZNF540-205ENST00000587220 ABCB11O95342 1321 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 ERICH2A1L162 156 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 TIMP1P01033 207 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 ITGB8P26012 769 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 NKX3-2P78367 333 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
ZNF540-205ENST00000587220 ZNF697Q5TEC3 545 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
ZNF540-205ENST00000587220 DNERQ8NFT8 737 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 MORC4Q8TE76 937 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 WDR11Q9BZH6 1224 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 IL25Q9H293 177 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 MYH6P13533 1939 aa12.44□□□□□ -0.42
ZNF540-205ENST00000587220 CTAGE5O15320 804 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 CHMLP26374 656 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 CPT1AP50416 773 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 CDK7P50613 346 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 ITGA7Q13683 1181 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 SART3Q15020 963 aaKnown RBP12.43□□□□□ -0.42
ZNF540-205ENST00000587220 PPP2R5BQ15173 497 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 FBXO11Q86XK2 927 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 MCF2L2Q86YR7 1114 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 TMEM199Q8N511 208 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 FAM161BQ96MY7 647 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
ZNF540-205ENST00000587220 MTMR10Q9NXD2 777 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 TBX21Q9UL17 535 aa12.43□□□□□ -0.42
ZNF540-205ENST00000587220 PTGS1P23219 599 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 QRICH1Q2TAL8 776 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 TMEM63BQ5T3F8 832 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
ZNF540-205ENST00000587220 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 SLC17A8Q8NDX2 589 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 PPP1R12CQ9BZL4 782 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 STXBP5LQ9Y2K9 1186 aa12.42□□□□□ -0.42
ZNF540-205ENST00000587220 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
ZNF540-205ENST00000587220 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
ZNF540-205ENST00000587220 MYL3P08590 195 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 CYP21A2P08686 494 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
ZNF540-205ENST00000587220 EPHB4P54760 987 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 PSMC6P62333 389 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
ZNF540-205ENST00000587220 PTH1RQ03431 593 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.42
ZNF540-205ENST00000587220 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 NSUN6Q8TEA1 469 aaKnown RBP12.41□□□□□ -0.42
ZNF540-205ENST00000587220 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 MAF1Q9H063 256 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
ZNF540-205ENST00000587220 RBM47A0AV96 593 aaKnown RBP12.4□□□□□ -0.42
ZNF540-205ENST00000587220 E7EWF7 191 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZNF540-205ENST00000587220 SGSM2O43147 1006 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 CFBP00751 764 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 CSF2RAP15509 400 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 EDNRBP24530 442 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 WTAPQ15007 396 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 SEC23AQ15436 765 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 RMDN3Q96TC7 470 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 TRPV6Q9H1D0 765 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
ZNF540-205ENST00000587220 B4GALT4O60513 344 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms