RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 SPTBN5Q9NRC6 3674 aaKnown RBP17.94■□□□□ 0.46
MBD1-215ENST00000586884 NFIBO00712 420 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
MBD1-215ENST00000586884 PTGS1P23219 599 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 PSMC6P62333 389 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 TTC14Q96N46 770 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 MPHOSPH6Q99547 160 aaKnown RBP17.94■□□□□ 0.46
MBD1-215ENST00000586884 WDR11Q9BZH6 1224 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 POLR3EQ9NVU0 708 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 UMODL1Q5DID0 1318 aa17.94■□□□□ 0.46
MBD1-215ENST00000586884 FRMPD2Q68DX3 1309 aaPredicted RBP17.94■□□□□ 0.46
MBD1-215ENST00000586884 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
MBD1-215ENST00000586884 PTPDC1A2A3K4 754 aa17.93■□□□□ 0.46
MBD1-215ENST00000586884 PDHBP11177 359 aa17.93■□□□□ 0.46
MBD1-215ENST00000586884 CPT1AP50416 773 aa17.93■□□□□ 0.46
MBD1-215ENST00000586884 USP38Q8NB14 1042 aa17.93■□□□□ 0.46
MBD1-215ENST00000586884 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
MBD1-215ENST00000586884 CXXC1Q9P0U4 656 aaPredicted RBP17.93■□□□□ 0.46
MBD1-215ENST00000586884 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
MBD1-215ENST00000586884 SUPT20HL2P0C7V6 817 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 CCL23P55773 120 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 ZNF543Q08ER8 600 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 AKNAD1Q5T1N1 836 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 SLC30A10Q6XR72 485 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 RNF207Q6ZRF8 634 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 ZNF589Q86UQ0 364 aaPredicted RBP17.92■□□□□ 0.46
MBD1-215ENST00000586884 RPUSD2Q8IZ73 545 aaKnown RBP17.92■□□□□ 0.46
MBD1-215ENST00000586884 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 CRBNQ96SW2 442 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 WNT8AQ9H1J5 351 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
MBD1-215ENST00000586884 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 CALML3P27482 149 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 NT5C2P49902 561 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 HAND2P61296 217 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 PURAQ00577 322 aaKnown RBP17.91■□□□□ 0.46
MBD1-215ENST00000586884 NMIQ13287 307 aaPredicted RBP17.91■□□□□ 0.46
MBD1-215ENST00000586884 BRDTQ58F21 947 aaPredicted RBP17.91■□□□□ 0.46
MBD1-215ENST00000586884 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 OTOP2Q7RTS6 562 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 RNF41Q9H4P4 317 aaPredicted RBP17.91■□□□□ 0.46
MBD1-215ENST00000586884 PRDM12Q9H4Q4 367 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 LCTP09848 1927 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 RAD50Q92878 1312 aa17.91■□□□□ 0.46
MBD1-215ENST00000586884 B4DLN1 442 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 NKRFO15226 690 aaKnown RBP eCLIP17.9■□□□□ 0.46
MBD1-215ENST00000586884 PFKMP08237 780 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 EDNRBP24530 442 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 MRPL12P52815 198 aaKnown RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 RPS6P62753 249 aaKnown RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 PDE4DQ08499 809 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 PPP2R5BQ15173 497 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 DNERQ8NFT8 737 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 OR6J1Q8NGC5 347 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 MTG1Q9BT17 334 aaPredicted RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 SLC28A3Q9HAS3 691 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 GPHNQ9NQX3 736 aaPredicted RBP17.9■□□□□ 0.46
MBD1-215ENST00000586884 SLC4A7Q9Y6M7 1214 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 CHD9Q3L8U1 2897 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 TNKSO95271 1327 aa17.9■□□□□ 0.46
MBD1-215ENST00000586884 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 KPNA6O60684 536 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 MYL3P08590 195 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 TBC1D10CQ8IV04 446 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 SCFD2Q8WU76 684 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 ESR2Q92731 530 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 MAF1Q9H063 256 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 NKX2-4Q9H2Z4 354 aa17.89■□□□□ 0.45
MBD1-215ENST00000586884 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
MBD1-215ENST00000586884 AAMPQ13685 434 aa17.88■□□□□ 0.45
MBD1-215ENST00000586884 DGKHQ86XP1 1220 aa17.88■□□□□ 0.45
MBD1-215ENST00000586884 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
MBD1-215ENST00000586884 ATXN2LQ8WWM7 1075 aaKnown RBP17.88■□□□□ 0.45
MBD1-215ENST00000586884 SCLYQ96I15 445 aa17.88■□□□□ 0.45
MBD1-215ENST00000586884 YBX2Q9Y2T7 364 aaKnown RBP17.88■□□□□ 0.45
MBD1-215ENST00000586884 A6NJR5 290 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 CYP2C9P11712 490 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 PTPN11Q06124 597 aaPredicted RBP17.87■□□□□ 0.45
MBD1-215ENST00000586884 ADGRE1Q14246 886 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 CCDC178Q5BJE1 867 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 NFRKBQ6P4R8 1299 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 VWCEQ96DN2 955 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 PCDHA11Q9Y5I1 949 aa17.87■□□□□ 0.45
MBD1-215ENST00000586884 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 ZNF213O14771 459 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
MBD1-215ENST00000586884 RFC2P35250 354 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 FAM47CQ5HY64 1035 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 PPM1EQ8WY54 764 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 PRDM6Q9NQX0 595 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 THEGQ9P2T0 379 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 NEDD4P46934 1319 aa17.86■□□□□ 0.45
MBD1-215ENST00000586884 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms