RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 EFEMP2O95967 443 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 PLCG1P19174 1290 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 SDHBP21912 280 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 LAPTM5Q13571 262 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-204ENST00000586792 SYTL5Q8TDW5 730 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-204ENST00000586792 FRMD6Q96NE9 622 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 KLHL14Q9P2G3 628 aa6.7□□□□□ -1.34
ZNF540-204ENST00000586792 NKTRP30414 1462 aaKnown RBP6.7□□□□□ -1.34
ZNF540-204ENST00000586792 RAB3GAP2Q9H2M9 1393 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 NWD1Q149M9 1564 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 UPK3BL1B0FP48 263 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 UPK3BL2E5RIL1 263 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-204ENST00000586792 MAGEA10P43363 369 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-204ENST00000586792 SLURP1P55000 103 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 PCBP3P57721 371 aaKnown RBP6.69□□□□□ -1.34
ZNF540-204ENST00000586792 RTP1P59025 263 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 TMEM201Q5SNT2 666 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 TMC6Q7Z403 805 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 SLFN12Q8IYM2 578 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 USHBP1Q8N6Y0 703 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 MPHOSPH9Q99550 1183 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 PCDHA5Q9Y5H7 936 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 LRRC7Q96NW7 1537 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 STRCP1A6NGW2 1772 aa6.69□□□□□ -1.34
ZNF540-204ENST00000586792 NEXMIFQ5QGS0 1516 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 DAGLBQ8NCG7 672 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 HHIPL1Q96JK4 782 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 CCDC74BQ96LY2 380 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 USP40Q9NVE5 1235 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 SETBP1Q9Y6X0 1596 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 MSH6P52701 1360 aa6.68□□□□□ -1.34
ZNF540-204ENST00000586792 FFAR3O14843 346 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 KCNA6P17658 529 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 TNFRSF1AP19438 455 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
ZNF540-204ENST00000586792 NMIQ13287 307 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-204ENST00000586792 RAB3GAP1Q15042 981 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 ZNF655Q8N720 491 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-204ENST00000586792 VWCEQ96DN2 955 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 FOXP3Q9BZS1 431 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 TCFL5Q9UL49 500 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 PIK3R4Q99570 1358 aa6.67□□□□□ -1.34
ZNF540-204ENST00000586792 CHD2O14647 1828 aaKnown RBP6.66□□□□□ -1.34
ZNF540-204ENST00000586792 WTIPA6NIX2 430 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-204ENST00000586792 PFKLP17858 780 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 LIG3P49916 1009 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 PDE4CQ08493 712 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 ZSCAN29Q8IWY8 852 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-204ENST00000586792 TBX22Q9Y458 520 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 RPGRIP1LQ68CZ1 1315 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 PPLO60437 1756 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 TMEM94Q12767 1356 aa6.66□□□□□ -1.34
ZNF540-204ENST00000586792 GRIN3BO60391 1043 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 RLBP1P12271 317 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 LINC00116Q8NCU8 138 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 JARID2Q92833 1246 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-204ENST00000586792 TCTN2Q96GX1 697 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 SETDB2Q96T68 719 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 PLCD4Q9BRC7 762 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 HDAC8Q9BY41 377 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 CORINQ9Y5Q5 1042 aa6.65□□□□□ -1.34
ZNF540-204ENST00000586792 ADAMTS13Q76LX8 1427 aa6.65□□□□□ -1.35
ZNF540-204ENST00000586792 NRXN3Q9Y4C0 1643 aa6.65□□□□□ -1.35
ZNF540-204ENST00000586792 IFT172Q9UG01 1749 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 XIRP1Q702N8 1843 aaKnown RBP6.64□□□□□ -1.35
ZNF540-204ENST00000586792 TMEM82A0PJX8 343 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 ADAM17P78536 824 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-204ENST00000586792 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 ANKRD30BQ9BXX2 1392 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 LAMC1P11047 1609 aa6.64□□□□□ -1.35
ZNF540-204ENST00000586792 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
ZNF540-204ENST00000586792 EIF4BP23588 611 aaKnown RBP6.63□□□□□ -1.35
ZNF540-204ENST00000586792 CYP4F8P98187 520 aa6.63□□□□□ -1.35
ZNF540-204ENST00000586792 CCDC84Q86UT8 332 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-204ENST00000586792 XRN1Q8IZH2 1706 aaKnown RBP6.63□□□□□ -1.35
ZNF540-204ENST00000586792 SLC16A11Q8NCK7 471 aa6.63□□□□□ -1.35
ZNF540-204ENST00000586792 FCRL2Q96LA5 508 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-204ENST00000586792 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
ZNF540-204ENST00000586792 IRS2Q9Y4H2 1338 aa6.63□□□□□ -1.35
ZNF540-204ENST00000586792 ALKQ9UM73 1620 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 NCOA3Q9Y6Q9 1424 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 FADS2P1A8MWK0 482 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 OVOL3O00110 214 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 MATN3O15232 486 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 BPNT1O95861 308 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 FSHBP01225 129 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 ATF3P18847 181 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 TFE3P19532 575 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-204ENST00000586792 NCKAP1LP55160 1127 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 RNF4P78317 190 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 KRTAP1-1Q07627 177 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms