RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 TRIM43Q96BQ3 446 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 TIMP1P01033 207 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
ACTN4-209ENST00000586538 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
ACTN4-209ENST00000586538 FAAP100Q0VG06 881 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 USH1GQ495M9 461 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
ACTN4-209ENST00000586538 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
ACTN4-209ENST00000586538 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
ACTN4-209ENST00000586538 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
ACTN4-209ENST00000586538 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.11□□□□□ -0.31
ACTN4-209ENST00000586538 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
ACTN4-209ENST00000586538 ADCY6O43306 1168 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 KPNA6O60684 536 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 GSPT1P15170 499 aaKnown RBP13.11□□□□□ -0.31
ACTN4-209ENST00000586538 SMPD1P17405 629 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 CDK7P50613 346 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 MFSD5Q6N075 450 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 SLC30A10Q6XR72 485 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 FBXO11Q86XK2 927 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
ACTN4-209ENST00000586538 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 STXBP5LQ9Y2K9 1186 aa13.11□□□□□ -0.31
ACTN4-209ENST00000586538 RBM47A0AV96 593 aaKnown RBP13.1□□□□□ -0.31
ACTN4-209ENST00000586538 EDNRBP24530 442 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 CHMLP26374 656 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 PDE4AP27815 886 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 SHHQ15465 462 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-209ENST00000586538 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 FAM126BQ8IXS8 530 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 TBX21Q9UL17 535 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 ASTN1O14525 1302 aa13.1□□□□□ -0.31
ACTN4-209ENST00000586538 LCTP09848 1927 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 BEX3Q00994 111 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 STXBP2Q15833 593 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 SLC43A3Q8NBI5 491 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 MTA3Q9BTC8 594 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 PDGFCQ9NRA1 345 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 MTMR10Q9NXD2 777 aa13.09□□□□□ -0.31
ACTN4-209ENST00000586538 MYH6P13533 1939 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-209ENST00000586538 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-209ENST00000586538 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
ACTN4-209ENST00000586538 ZBTB5O15062 677 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 CTAGE5O15320 804 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 SGSM2O43147 1006 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 CYP21A2P08686 494 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
ACTN4-209ENST00000586538 WTAPQ15007 396 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
ACTN4-209ENST00000586538 MTG1Q9BT17 334 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-209ENST00000586538 CD4P01730 458 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 PFKMP08237 780 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
ACTN4-209ENST00000586538 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
ACTN4-209ENST00000586538 SEC23AQ15436 765 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 RPUSD2Q8IZ73 545 aaKnown RBP13.07□□□□□ -0.32
ACTN4-209ENST00000586538 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
ACTN4-209ENST00000586538 E7EWF7 191 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 CFBP00751 764 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 MYL3P08590 195 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 ITGB8P26012 769 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 KIF5BP33176 963 aa13.06□□□□□ -0.32
ACTN4-209ENST00000586538 PURAQ00577 322 aaKnown RBP13.06□□□□□ -0.32
ACTN4-209ENST00000586538 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms