RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 SLC25A27O95847 323 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 UBE2HP62256 183 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 TRAF1Q13077 416 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 WWC2Q6AWC2 1192 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 PORCNQ9H237 461 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 POLR3EQ9NVU0 708 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 RTEL1Q9NZ71 1219 aa20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 TFIP11Q9UBB9 837 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-222ENST00000585867 STXBP3O00186 592 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 ERCC3P19447 782 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 SP3Q02447 781 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 TKFCQ3LXA3 575 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 DAGLBQ8NCG7 672 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 LEO1Q8WVC0 666 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 GPKOWQ92917 476 aaPredicted RBP eCLIP20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 TRERF1Q96PN7 1200 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
RBFOX1-222ENST00000585867 ABCB11O95342 1321 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 ECM2O94769 699 aaPredicted RBP20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 YEATS4O95619 227 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 NAPAP54920 295 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 RILPL1Q5EBL4 403 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 WDR78Q5VTH9 848 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 SHCBP1Q8NEM2 672 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 MROH8Q9H579 483 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 RNF146Q9NTX7 359 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 PCDHA4Q9UN74 947 aa20.4■□□□□ 0.86
RBFOX1-222ENST00000585867 ESYT2A0FGR8 921 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 GNA11P29992 359 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 COPB2P35606 906 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 MUM1L1Q5H9M0 696 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 CHST13Q8NET6 341 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 USP28Q96RU2 1077 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 C6orf50Q9HD87 102 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 RCOR1Q9UKL0 485 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 NOL7Q9UMY1 257 aaKnown RBP20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 MRPL11Q9Y3B7 192 aaKnown RBP20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.85
RBFOX1-222ENST00000585867 GOLGA6L4A6NEF3 574 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 NASPP49321 788 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 NOM1Q5C9Z4 860 aaKnown RBP20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 BLIDQ8IZY5 108 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 BICD2Q8TD16 824 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 KCNG4Q8TDN1 519 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 SHISA4Q96DD7 197 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 FBXO40Q9UH90 709 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 FKTNO75072 461 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 MAPK4P31152 587 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 NR5A1Q13285 461 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 KIF22Q14807 665 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 ANO1Q5XXA6 986 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 ZMYND12Q9H0C1 365 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 ACAD9Q9H845 621 aa20.38■□□□□ 0.85
RBFOX1-222ENST00000585867 STK38Q15208 465 aa20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 NPY5RQ15761 445 aa20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 OXER1Q8TDS5 423 aa20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 ZNF296Q8WUU4 475 aaPredicted RBP20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 GLT8D2Q9H1C3 349 aa20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 CEP131Q9UPN4 1083 aa20.37■□□□□ 0.85
RBFOX1-222ENST00000585867 NFIBO00712 420 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 HSPA1AP0DMV8 641 aaKnown RBP20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 HSPA1BP0DMV9 641 aaKnown RBP20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 PSMC4P43686 418 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 TRAPPC10P48553 1259 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 TYW1BQ6NUM6 668 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 GPR142Q7Z601 462 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 PLEKHH3Q7Z736 793 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 TNFRSF25Q93038 417 aa20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 SYAP1Q96A49 352 aaPredicted RBP20.36■□□□□ 0.85
RBFOX1-222ENST00000585867 FOXN1O15353 648 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 CTGFP29279 349 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 FCGRTP55899 365 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 SF3A1Q15459 793 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 LINC00301Q8NCQ3 95 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 ARHGAP39Q9C0H5 1083 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 CLIC4Q9Y696 253 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 IVNS1ABPQ9Y6Y0 642 aa20.35■□□□□ 0.85
RBFOX1-222ENST00000585867 SMCO2A6NFE2 343 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 TNPO2O14787 897 aaKnown RBP20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 OPLAHO14841 1288 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 STRNO43815 780 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 GADD45BO75293 160 aaPredicted RBP20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 BMP15O95972 392 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 FCER1AP12319 257 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 KCTD2Q14681 263 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 NSMFQ6X4W1 530 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 MCF2L2Q86YR7 1114 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 ANKRD35Q8N283 1001 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 CD99L2Q8TCZ2 262 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 MMP19Q99542 508 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 CCDC194A0A1B0GVG4 234 aa20.34■□□□□ 0.85
RBFOX1-222ENST00000585867 SPTLC2O15270 562 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms