RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 CCDC178Q5BJE1 867 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
VAPA-209ENST00000585042 EEPD1Q7L9B9 569 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
VAPA-209ENST00000585042 RGS22Q8NE09 1264 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 WDR11Q9BZH6 1224 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
VAPA-209ENST00000585042 MTMR7Q9Y216 660 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 NKRFO15226 690 aaKnown RBP eCLIP17.64■□□□□ 0.412e-10■■■□□ 15.3
VAPA-209ENST00000585042 SUPT20HL2P0C7V6 817 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 CYP2C18P33260 490 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 CPT1AP50416 773 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 ZNF543Q08ER8 600 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
VAPA-209ENST00000585042 DGKHQ86XP1 1220 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 RPUSD2Q8IZ73 545 aaKnown RBP17.64■□□□□ 0.41
VAPA-209ENST00000585042 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 ESR2Q92731 530 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
VAPA-209ENST00000585042 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 TRIM6-TRIM34B2RNG4 842 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 NFIBO00712 420 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 KPNA6O60684 536 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 RAB30Q15771 203 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
VAPA-209ENST00000585042 RNF207Q6ZRF8 634 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 RASGRP2Q7LDG7 609 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 ZNF589Q86UQ0 364 aaPredicted RBP17.63■□□□□ 0.41
VAPA-209ENST00000585042 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
VAPA-209ENST00000585042 PBX4Q9BYU1 374 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 LRRC37A2A6NM11 1700 aa17.63■□□□□ 0.41
VAPA-209ENST00000585042 ZNF213O14771 459 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 B4GALT4O60513 344 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 ACRP10323 421 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 SDSP20132 328 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 EDNRBP24530 442 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 RILPL2Q969X0 211 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 PURBQ96QR8 312 aaKnown RBP17.62■□□□□ 0.41
VAPA-209ENST00000585042 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
VAPA-209ENST00000585042 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
VAPA-209ENST00000585042 MSRAQ9UJ68 235 aa17.62■□□□□ 0.41
VAPA-209ENST00000585042 FRMPD2Q68DX3 1309 aaPredicted RBP17.62■□□□□ 0.41
VAPA-209ENST00000585042 LCTP09848 1927 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 PFKMP08237 780 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 HAND2P61296 217 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 RPS6P62753 249 aaKnown RBP17.61■□□□□ 0.41
VAPA-209ENST00000585042 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
VAPA-209ENST00000585042 SCFD2Q8WU76 684 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 GPHNQ9NQX3 736 aaPredicted RBP17.61■□□□□ 0.41
VAPA-209ENST00000585042 DDX49Q9Y6V7 483 aaKnown RBP17.61■□□□□ 0.41
VAPA-209ENST00000585042 RAD50Q92878 1312 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
VAPA-209ENST00000585042 CDH23Q9H251 3354 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 HIP1O00291 1037 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 CALML3P27482 149 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 PSMC6P62333 389 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 PDE4DQ08499 809 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 CHD1LQ86WJ1 897 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 IQCA1Q86XH1 822 aa17.6■□□□□ 0.41
VAPA-209ENST00000585042 GAS2L1Q99501 681 aaPredicted RBP17.6■□□□□ 0.41
VAPA-209ENST00000585042 MTG1Q9BT17 334 aaPredicted RBP17.6■□□□□ 0.41
VAPA-209ENST00000585042 A6NJR5 290 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
VAPA-209ENST00000585042 NFRKBQ6P4R8 1299 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 TBC1D10CQ8IV04 446 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
VAPA-209ENST00000585042 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 GRXCR1A8MXD5 290 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 PTGS1P23219 599 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 PBX2P40425 430 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 CCL23P55773 120 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 NUCB1Q02818 461 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 SLC28A3Q9HAS3 691 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 CXXC1Q9P0U4 656 aaPredicted RBP17.58■□□□□ 0.4
VAPA-209ENST00000585042 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
VAPA-209ENST00000585042 TNKSO95271 1327 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 MYL3P08590 195 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 RFC2P35250 354 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 TTLL4Q14679 1199 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 MCF2L2Q86YR7 1114 aa17.57■□□□□ 0.4
VAPA-209ENST00000585042 PNMA1Q8ND90 353 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms