RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
CASC3-210ENST00000584997 ADD3Q9UEY8 706 aaKnown RBP12.3□□□□□ -0.44
CASC3-210ENST00000584997 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 TCF20Q9UGU0 1960 aaKnown RBP12.3□□□□□ -0.44
CASC3-210ENST00000584997 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
CASC3-210ENST00000584997 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
CASC3-210ENST00000584997 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
CASC3-210ENST00000584997 ICAM1P05362 532 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 ATP2A2P16615 1042 aaKnown RBP12.29□□□□□ -0.44
CASC3-210ENST00000584997 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 TMEM63BQ5T3F8 832 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
CASC3-210ENST00000584997 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
CASC3-210ENST00000584997 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASC3-210ENST00000584997 TNKSO95271 1327 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 TRANK1O15050 2925 aa12.29□□□□□ -0.44
CASC3-210ENST00000584997 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 PFKMP08237 780 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 MYL3P08590 195 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 CYP2C9P11712 490 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 MYOGP15173 224 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 CPT1AP50416 773 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
CASC3-210ENST00000584997 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
CASC3-210ENST00000584997 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
CASC3-210ENST00000584997 BRDTQ58F21 947 aaPredicted RBP12.28□□□□□ -0.44
CASC3-210ENST00000584997 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 MORC4Q8TE76 937 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 IL17RBQ9NRM6 502 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
CASC3-210ENST00000584997 RAD50Q92878 1312 aa12.28□□□□□ -0.44
CASC3-210ENST00000584997 SCN10AQ9Y5Y9 1956 aa12.27□□□□□ -0.44
CASC3-210ENST00000584997 LOC102724159A0A0B4J2E5 919 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 NFIBO00712 420 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
CASC3-210ENST00000584997 ACTN1P12814 892 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 SLC16A2P36021 539 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 PURAQ00577 322 aaKnown RBP12.27□□□□□ -0.45
CASC3-210ENST00000584997 TTLL4Q14679 1199 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 PWP2Q15269 919 aaKnown RBP12.27□□□□□ -0.45
CASC3-210ENST00000584997 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 OR6J1Q8NGC5 347 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
CASC3-210ENST00000584997 RANBP17Q9H2T7 1088 aaKnown RBP12.27□□□□□ -0.45
CASC3-210ENST00000584997 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 REV3LO60673 3130 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.45
CASC3-210ENST00000584997 CA3P07451 260 aa12.26□□□□□ -0.45
CASC3-210ENST00000584997 MX1P20591 662 aa12.26□□□□□ -0.45
CASC3-210ENST00000584997 TTBK2Q6IQ55 1244 aa12.26□□□□□ -0.45
CASC3-210ENST00000584997 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
CASC3-210ENST00000584997 MTG1Q9BT17 334 aaPredicted RBP12.26□□□□□ -0.45
CASC3-210ENST00000584997 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
CASC3-210ENST00000584997 FRMPD2Q68DX3 1309 aaPredicted RBP12.26□□□□□ -0.45
CASC3-210ENST00000584997 NKRFO15226 690 aaKnown RBP eCLIP12.25□□□□□ -0.45
CASC3-210ENST00000584997 FOXP2O15409 715 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 ORC4O43929 436 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
CASC3-210ENST00000584997 CALML3P27482 149 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 RFC2P35250 354 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 TFF2Q03403 129 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 PDE4DQ08499 809 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
CASC3-210ENST00000584997 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 RETREG2Q8NC44 543 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 SLC9A7Q96T83 725 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
CASC3-210ENST00000584997 CERS4Q9HA82 394 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 NOD1Q9Y239 953 aa12.25□□□□□ -0.45
CASC3-210ENST00000584997 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
CASC3-210ENST00000584997 RBM47A0AV96 593 aaKnown RBP12.24□□□□□ -0.45
CASC3-210ENST00000584997 B4DLN1 442 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 NOVP48745 357 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
CASC3-210ENST00000584997 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 BFSP2Q13515 415 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 VPS53Q5VIR6 699 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 NFRKBQ6P4R8 1299 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 TET1Q8NFU7 2136 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 SCFD2Q8WU76 684 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms