RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	ALDH5A1	P51649	535 aa	Predicted RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	SYNE3	Q6ZMZ3	975 aa		18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	SRBD1	Q8N5C6	995 aa	Known RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	DIS3L	Q8TF46	1054 aa	Known RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	PAWR	Q96IZ0	340 aa	Known RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	PURB	Q96QR8	312 aa	Known RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	ZSWIM6	Q9HCJ5	1215 aa		18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	MAP3K20	Q9NYL2	800 aa	Known RBP	18.85	■□□□□ 0.61
ERBB2-222	ENST00000584908	CEP290	O15078	2479 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	PLEKHA8P1	O95397	391 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	RXRA	P19793	462 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	CAST	P20810	708 aa	Known RBP	18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	EDNRB	P24530	442 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	HSD17B4	P51659	736 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908		Q6ZUG5	572 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	TMTC3	Q6ZXV5	915 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	NECAB2	Q7Z6G3	386 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	MICU3	Q86XE3	530 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	HOMER1	Q86YM7	354 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	TBC1D5	Q92609	795 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	IL17RA	Q96F46	866 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	RBM28	Q9NW13	759 aa	Known RBP	18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	FAM184B	Q9ULE4	1060 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	NID2	Q14112	1375 aa		18.84	■□□□□ 0.61
ERBB2-222	ENST00000584908	ZBTB43	O43298	467 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	RARB	P10826	455 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	CALML3	P27482	149 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	EVC	P57679	992 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	PPP2R5B	Q15173	497 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	RUFY3	Q7L099	469 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	ARRDC4	Q8NCT1	418 aa		18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	RRP36	Q96EU6	259 aa	Known RBP	18.83	■□□□□ 0.61
ERBB2-222	ENST00000584908	KLF18	A0A0U1RQI7	1052 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	DNM1L	O00429	736 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	ANAPC15	P60006	121 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	CCDC144B	Q3MJ40	725 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	HTATIP2	Q9BUP3	242 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	C11orf49	Q9H6J7	331 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	VTA1	Q9NP79	307 aa		18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.82	■□□□□ 0.6
ERBB2-222	ENST00000584908	KIAA1217	Q5T5P2	1943 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	DUSP11	O75319	330 aa	Known RBP	18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	FGD1	P98174	961 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	FUT2	Q10981	343 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	ANO1	Q5XXA6	986 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	TAPT1	Q6NXT6	567 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	RAB11FIP4	Q86YS3	637 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	BRF1	Q92994	677 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	XPNPEP3	Q9NQH7	507 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908	COL20A1	Q9P218	1284 aa		18.81	■□□□□ 0.6
ERBB2-222	ENST00000584908		B4DLN1	442 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	ADCY6	O43306	1168 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	ADAMTS4	O75173	837 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	MRPL12	P52815	198 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	NKX3-2	P78367	333 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	APOBR	Q0VD83	1088 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	LRRC41	Q15345	812 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	RTN1	Q16799	776 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	CMTR1	Q8N1G2	835 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	MPHOSPH6	Q99547	160 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	SEC63	Q9UGP8	760 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	CYP46A1	Q9Y6A2	500 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	DDX49	Q9Y6V7	483 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	CNTNAP5	Q8WYK1	1306 aa		18.8	■□□□□ 0.6
ERBB2-222	ENST00000584908	RBM47	A0AV96	593 aa	Known RBP	18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	GOLGA8A	A7E2F4	631 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	GOLGA8B	A8MQT2	603 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	CFB	P00751	764 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	NSUN6	Q8TEA1	469 aa	Known RBP	18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	TAAR1	Q96RJ0	339 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	IWS1	Q96ST2	819 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	UPF3A	Q9H1J1	476 aa	Known RBP	18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	SYNRG	Q9UMZ2	1314 aa		18.79	■□□□□ 0.6
ERBB2-222	ENST00000584908	CST5	P28325	142 aa	Predicted RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	CDC27	P30260	824 aa		18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	TOB2	Q14106	344 aa	Predicted RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	GJC2	Q5T442	439 aa	Predicted RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	IQSEC1	Q6DN90	963 aa		18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	FBXO16	Q8IX29	292 aa	Predicted RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	KLHDC9	Q8NEP7	349 aa		18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	LENG1	Q96BZ8	264 aa	Predicted RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	RMDN3	Q96TC7	470 aa		18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	GNE	Q9Y223	722 aa	Known RBP	18.78	■□□□□ 0.6
ERBB2-222	ENST00000584908	CCDC196	A0A1B0GTZ2	297 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	KBTBD13	C9JR72	458 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	SEC24B	O95487	1268 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	METAP2	P50579	478 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	GJA9	P57773	515 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	TNFAIP2	Q03169	654 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	PDE4D	Q08499	809 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	C8orf34	Q49A92	452 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	RNF180	Q86T96	592 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	PIBF1	Q8WXW3	757 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	TSEN34	Q9BSV6	310 aa	Known RBP	18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908	PDGFC	Q9NRA1	345 aa		18.77	■□□□□ 0.6
ERBB2-222	ENST00000584908		Q9Y3F1	56 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms