RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CPVLQ9H3G5 476 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 SENP2Q9HC62 589 aa20.84■□□□□ 0.93
ERBB2-221ENST00000584888 WDR19Q8NEZ3 1342 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 CDC45O75419 566 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 CDK7P50613 346 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 EPHB4P54760 987 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 CLEC4DQ8WXI8 215 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 PURBQ96QR8 312 aaKnown RBP20.83■□□□□ 0.93
ERBB2-221ENST00000584888 PNMA2Q9UL42 364 aa20.83■□□□□ 0.93
ERBB2-221ENST00000584888 GNEQ9Y223 722 aaKnown RBP20.83■□□□□ 0.93
ERBB2-221ENST00000584888 MYH6P13533 1939 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 IFIT3O14879 490 aaKnown RBP20.82■□□□□ 0.92
ERBB2-221ENST00000584888 BEX3Q00994 111 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
ERBB2-221ENST00000584888 EEPD1Q7L9B9 569 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 RALYLQ86SE5 291 aaKnown RBP20.82■□□□□ 0.92
ERBB2-221ENST00000584888 ADGRF4Q8IZF3 695 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 MTA3Q9BTC8 594 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 ANO2Q9NQ90 1003 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 PDGFCQ9NRA1 345 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
ERBB2-221ENST00000584888 MROH7Q68CQ1 1323 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 BAZ2BQ9UIF8 2168 aaKnown RBP20.81■□□□□ 0.92
ERBB2-221ENST00000584888 PALM3A6NDB9 673 aaPredicted RBP20.81■□□□□ 0.92
ERBB2-221ENST00000584888 ARVCFO00192 962 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 NFIBO00712 420 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 PARP1P09874 1014 aaKnown RBP20.81■□□□□ 0.92
ERBB2-221ENST00000584888 SMPD1P17405 629 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 BAATQ14032 418 aaPredicted RBP20.81■□□□□ 0.92
ERBB2-221ENST00000584888 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 TAPT1Q6NXT6 567 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 CHST3Q7LGC8 479 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 STAG2Q8N3U4 1231 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 MORC4Q8TE76 937 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 MAD2L2Q9UI95 211 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 TBX21Q9UL17 535 aa20.81■□□□□ 0.92
ERBB2-221ENST00000584888 A0A0U1RQG5 324 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-221ENST00000584888 DYNC1LI2O43237 492 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-221ENST00000584888 TIMP1P01033 207 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 PTGS1P23219 599 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 FPGSQ05932 587 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 TROAPQ12815 778 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 TLK2Q86UE8 772 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 FBXO16Q8IX29 292 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-221ENST00000584888 MTMR8Q96EF0 704 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 FAM161BQ96MY7 647 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 GUCD1Q96NT3 240 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 AP5M1Q9H0R1 490 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 JMJD4Q9H9V9 463 aa20.8■□□□□ 0.92
ERBB2-221ENST00000584888 ADD3Q9UEY8 706 aaKnown RBP20.8■□□□□ 0.92
ERBB2-221ENST00000584888 SMAD3P84022 425 aaKnown RBP20.79■□□□□ 0.92
ERBB2-221ENST00000584888 GRM4Q14833 912 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 WTAPQ15007 396 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 SLC35G1Q2M3R5 365 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 TSGA10IPQ3SY00 556 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 CXCL17Q6UXB2 119 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
ERBB2-221ENST00000584888 VTA1Q9NP79 307 aa20.79■□□□□ 0.92
ERBB2-221ENST00000584888 COL6A3P12111 3177 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 ERICH2A1L162 156 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 PTPDC1A2A3K4 754 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 ALDH5A1P51649 535 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 SART3Q15020 963 aaKnown RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 CDC37Q16543 378 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 FSCN1Q16658 493 aaKnown RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 TMEM67Q5HYA8 995 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 RGS22Q8NE09 1264 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 LY9Q9HBG7 655 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 GPHNQ9NQX3 736 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-221ENST00000584888 Q9Y3F1 56 aa20.78■□□□□ 0.92
ERBB2-221ENST00000584888 QRICH1Q2TAL8 776 aa20.77■□□□□ 0.92
ERBB2-221ENST00000584888 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
ERBB2-221ENST00000584888 RNF207Q6ZRF8 634 aa20.77■□□□□ 0.92
ERBB2-221ENST00000584888 MAF1Q9H063 256 aa20.77■□□□□ 0.92
ERBB2-221ENST00000584888 LRRC37A2A6NM11 1700 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 LOC102724159A0A0B4J2E5 919 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 PRC1O43663 620 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 ZEB2O60315 1214 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 CABYRO75952 493 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 CALML3P27482 149 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 MCM5P33992 734 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 PWP2Q15269 919 aaKnown RBP20.76■□□□□ 0.91
ERBB2-221ENST00000584888 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 SLC30A10Q6XR72 485 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 RASEFQ8IZ41 740 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 KCNB2Q92953 911 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 MAP3K14Q99558 947 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 SEMA6BQ9H3T3 888 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 RIOX1Q9H6W3 641 aa20.76■□□□□ 0.91
ERBB2-221ENST00000584888 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
ERBB2-221ENST00000584888 TLR3O15455 904 aaKnown RBP20.75■□□□□ 0.91
ERBB2-221ENST00000584888 CD4P01730 458 aa20.75■□□□□ 0.91
ERBB2-221ENST00000584888 SLC43A3Q8NBI5 491 aa20.75■□□□□ 0.91
ERBB2-221ENST00000584888 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms