RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 YBX2Q9Y2T7 364 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 COL11A1P12107 1806 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PLIN4Q96Q06 1357 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 TSPY2A6NKD2 308 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 B4GALT4O60513 344 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 COL9A1P20849 921 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RABGGTBP53611 331 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RCSD1Q6JBY9 416 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 TAPT1Q6NXT6 567 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 KIAA1211Q6ZU35 1233 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ADAMTS19Q8TE59 1207 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 NOC4LQ9BVI4 516 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CCPG1Q9ULG6 757 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 Q9Y3F1 56 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 SLC4A7Q9Y6M7 1214 aa15.43■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ZBBXA8MT70 800 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PLA2G6O60733 806 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 TMEM63BQ5T3F8 832 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PURBQ96QR8 312 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 WNT8AQ9H1J5 351 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 INCENPQ9NQS7 918 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ZNFX1Q9P2E3 1918 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RAD50Q92878 1312 aa15.42■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MUC3AQ02505 3323 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 NMT2O60551 498 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MYOGP15173 224 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PPP2R2DQ66LE6 453 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ZNF589Q86UQ0 364 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MICALL1Q8N3F8 863 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 SCLYQ96I15 445 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 UHRF1Q96T88 793 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ALDH8A1Q9H2A2 487 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 TSPYL2Q9H2G4 693 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 VTA1Q9NP79 307 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PLXNA1Q9UIW2 1896 aa15.41■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RANBP6O60518 1105 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 SUPT20HL2P0C7V6 817 aa15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CTDSPL2Q05D32 466 aa15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RRP12Q5JTH9 1297 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 VPS53Q5VIR6 699 aa15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RASGRP2Q7LDG7 609 aa15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CTNNA3Q9UI47 895 aa15.4■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 GREB1LQ9C091 1923 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ZNF213O14771 459 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ICAM1P05362 532 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 MYL3P08590 195 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 CYP2C9P11712 490 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 SLC16A2P36021 539 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 DUSP28Q4G0W2 176 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 DEFB128Q7Z7B8 93 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 GPHNQ9NQX3 736 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 TRMT13Q9NUP7 481 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ADD3Q9UEY8 706 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 PCDHA11Q9Y5I1 949 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
CDK5RAP3-234ENST00000584525 PTPDC1A2A3K4 754 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 FGAP02671 866 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 HAND2P61296 217 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 SKIV2LQ15477 1246 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ALX1Q15699 326 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 TTBK2Q6IQ55 1244 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 RANBP17Q9H2T7 1088 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 POLR3EQ9NVU0 708 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 TNKSO95271 1327 aa15.38■□□□□ 0.05
CDK5RAP3-234ENST00000584525 PFKMP08237 780 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 CHMLP26374 656 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 CPT1AP50416 773 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 BRDTQ58F21 947 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 OR6J1Q8NGC5 347 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 VWCEQ96DN2 955 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 MTG1Q9BT17 334 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 RAPGEFL1Q9UHV5 662 aa15.37■□□□□ 0.05
CDK5RAP3-234ENST00000584525 NFIBO00712 420 aa15.36■□□□□ 0.05
CDK5RAP3-234ENST00000584525 CALML3P27482 149 aa15.36■□□□□ 0.05
CDK5RAP3-234ENST00000584525 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms