RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 ARVCFO00192 962 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 FLOT1O75955 427 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 TDO2P48775 406 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 ZXDAP98168 799 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
CCDC47-206ENST00000584112 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 M0R2C6 588 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 GALR2O43603 387 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 STRNO43815 780 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 CD4P01730 458 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 APPP05067 770 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 EEF2P13639 858 aaKnown RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 CCSAPQ6IQ19 270 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 SIAH1Q8IUQ4 282 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 KLHDC9Q8NEP7 349 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 NACAP1Q9BZK3 213 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 SPATC1LQ9H0A9 340 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 ASH1LQ9NR48 2969 aaKnown RBP13.25□□□□□ -0.29
CCDC47-206ENST00000584112 MCM3APO60318 1980 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 ASPMQ8IZT6 3477 aa13.25□□□□□ -0.29
CCDC47-206ENST00000584112 MOXD2PA6NHM9 499 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 PATL2C9JE40 543 aaKnown RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 PDGFBP01127 241 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 CLUL1Q15846 466 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 MOV10L1Q9BXT6 1211 aaKnown RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 MROH8Q9H579 483 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 SH2B1Q9NRF2 756 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-206ENST00000584112 FAM50BQ9Y247 325 aa13.24□□□□□ -0.29
CCDC47-206ENST00000584112 ELP1O95163 1332 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 SALL3Q9BXA9 1300 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 RASA1P20936 1047 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 PLS1Q14651 629 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 ATG4CQ96DT6 458 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 MAML3Q96JK9 1138 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 NOC4LQ9BVI4 516 aaKnown RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
CCDC47-206ENST00000584112 SLC5A4Q9NY91 659 aa13.23□□□□□ -0.29
CCDC47-206ENST00000584112 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 RAD21O60216 631 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 SLC25A27O95847 323 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 ERCC3P19447 782 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 PDE4BQ07343 736 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 TMCO2Q7Z6W1 182 aaPredicted RBP13.22□□□□□ -0.29
CCDC47-206ENST00000584112 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 NAPBQ9H115 298 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 LAMA4Q16363 1823 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
CCDC47-206ENST00000584112 SIP14410 1827 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 ASGR1P07306 291 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 ABRAQ8N0Z2 381 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 SLC9A7Q96T83 725 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
CCDC47-206ENST00000584112 POP1Q99575 1024 aaKnown RBP13.21□□□□□ -0.29
CCDC47-206ENST00000584112 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC47-206ENST00000584112 DLL3Q9NYJ7 618 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
CCDC47-206ENST00000584112 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 MYH6P13533 1939 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 ZNF865P0CJ78 1059 aaPredicted RBP13.2□□□□□ -0.3
CCDC47-206ENST00000584112 FCER1AP12319 257 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 COPB2P35606 906 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 PDE1AP54750 535 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
CCDC47-206ENST00000584112 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms