RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PIK3AP1Q6ZUJ8 805 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ZNF396Q96N95 335 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ANO3Q9BYT9 981 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TXNRD2Q9NNW7 524 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 RBPJLQ9UBG7 517 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 RIPK3Q9Y572 518 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MYH7BA7E2Y1 1941 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ZNF236Q9UL36 1845 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FAM205CA6NFA0 338 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 DNM1Q05193 864 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TAF1CQ15572 869 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FAM110CQ1W6H9 321 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MUM1L1Q5H9M0 696 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 EARS2Q5JPH6 523 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 JAKMIP3Q5VZ66 844 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FAM173BQ6P4H8 233 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 USP17L6PQ6QN14 398 aa19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MOV10L1Q9BXT6 1211 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 BIN2Q9UBW5 565 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-230ENST00000584042 PLXNB2O15031 1838 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 SPDYE3A6NKU9 549 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CFBP00751 764 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CCNA1P78396 465 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 NOM1Q5C9Z4 860 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 EHMT1Q9H9B1 1298 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 POLR3EQ9NVU0 708 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TMEM260Q9NX78 707 aa19.1■□□□□ 0.65
CDK5RAP3-230ENST00000584042 PFASO15067 1338 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FRMPD4Q14CM0 1322 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ALDH1A1P00352 501 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FOXD4L6Q3SYB3 417 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FOXD4L3Q6VB84 417 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 RNF207Q6ZRF8 634 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 GPRC5AQ8NFJ5 357 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 USP28Q96RU2 1077 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CFAP45Q9UL16 551 aa19.09■□□□□ 0.65
CDK5RAP3-230ENST00000584042 YEATS4O95619 227 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 HOXA13P31271 388 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 SREBF1P36956 1147 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TOB1P50616 345 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 GRM1Q13255 1194 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ORC2Q13416 577 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CSPP1Q1MSJ5 1256 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 INF2Q27J81 1249 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 SLC30A10Q6XR72 485 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NEK8Q86SG6 692 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TMEM87AQ8NBN3 555 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 PGBD1Q96JS3 809 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ZIC5Q96T25 663 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 SCAND2PQ9GZW5 306 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 MROH8Q9H579 483 aa19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 A1CFQ9NQ94 594 aaKnown RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 MORC2Q9Y6X9 1032 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-230ENST00000584042 RPTORQ8N122 1335 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 PEX10O60683 326 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 BCRP11274 1271 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ERCC3P19447 782 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TTC38Q5R3I4 469 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ANO1Q5XXA6 986 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NSMFQ6X4W1 530 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NCAPG2Q86XI2 1143 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ANKRD13CQ8N6S4 541 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 SYTL5Q8TDW5 730 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TBCKQ8TEA7 893 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CRYGNQ8WXF5 182 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CHAMP1Q96JM3 812 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ZFYVE28Q9HCC9 887 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 LRRC37A2A6NM11 1700 aa19.07■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ELP1O95163 1332 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 FIBPO43427 364 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TLR2O60603 784 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 AOC2O75106 756 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 BMP15O95972 392 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NCLP19338 710 aaKnown RBP19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 MAP2K2P36507 400 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 Q3C1V9 767 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 MOXD1Q6UVY6 613 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 TBC1D5Q92609 795 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 NAP1L4Q99733 375 aaKnown RBP19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 FTOQ9C0B1 505 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CYP39A1Q9NYL5 469 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 COL20A1Q9P218 1284 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CEP131Q9UPN4 1083 aa19.06■□□□□ 0.64
CDK5RAP3-230ENST00000584042 GOLGA6L22H0YM25 854 aa19.05■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CA12O43570 354 aa19.05■□□□□ 0.64
CDK5RAP3-230ENST00000584042 GCFC2P16383 781 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP3-230ENST00000584042 FCHSD1Q86WN1 690 aa19.05■□□□□ 0.64
CDK5RAP3-230ENST00000584042 WNT7AO00755 349 aa19.04■□□□□ 0.64
CDK5RAP3-230ENST00000584042 USP11P51784 963 aa19.04■□□□□ 0.64
CDK5RAP3-230ENST00000584042 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
CDK5RAP3-230ENST00000584042 CRHR2Q13324 411 aa19.04■□□□□ 0.64
CDK5RAP3-230ENST00000584042 BAATQ14032 418 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-230ENST00000584042 SF3A1Q15459 793 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms