RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 HLA-DQA1Q5Y7H0 255 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 OLFML2BQ68BL8 750 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 DPH6Q7L8W6 267 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 TMC6Q7Z403 805 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 AMIGO3Q86WK7 504 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 ACSL6Q9UKU0 697 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 SUGT1Q9Y2Z0 365 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 IRAK3Q9Y616 596 aa6.03□□□□□ -1.44
PPP4R1-227ENST00000583988 A0A1W2PQJ5 194 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 HRKO00198 91 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 RFXAPO00287 272 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 ABLIM1O14639 778 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 IGSF3O75054 1194 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 VAMP4O75379 141 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 PI3P19957 117 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 YBX1P67809 324 aaKnown RBP6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 SV2CQ496J9 727 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 ZNF385BQ569K4 471 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 POMZP3Q6PJE2 187 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 NOP9Q86U38 636 aaKnown RBP6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 MRGPRX3Q96LB0 322 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 KLHL14Q9P2G3 628 aa6.02□□□□□ -1.45
PPP4R1-227ENST00000583988 N4BP3O15049 544 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 FGF10O15520 208 aaPredicted RBP6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 PDPK1O15530 556 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 CAPNS1P04632 268 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 ITGAVP06756 1048 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 MSL3P1P0C860 447 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 MVKQ03426 396 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 CCDC144BQ3MJ40 725 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 CYP2R1Q6VVX0 501 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 CRACR2BQ8N4Y2 399 aaPredicted RBP6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 SGSM3Q96HU1 749 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 SIGLEC10Q96LC7 697 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 PTCHD1Q96NR3 888 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 MCMBPQ9BTE3 642 aa6.01□□□□□ -1.45
PPP4R1-227ENST00000583988 IQCA1LA6NCM1 817 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 AURKAO14965 403 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 KCNH1O95259 989 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 TBC1D8O95759 1140 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 CDR1P51861 262 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 AMPD2Q01433 879 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 TMEM62Q0P6H9 643 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 RASA3Q14644 834 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 DPY19L1Q2PZI1 675 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 SLC10A6Q3KNW5 377 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 TCERG1LQ5VWI1 586 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 BICRALQ6AI39 1079 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 RPTNQ6XPR3 784 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 TRIM59Q8IWR1 403 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 MZB1Q8WU39 189 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 DEPDC7Q96QD5 511 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 TNFRSF12AQ9NP84 129 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 CYP26B1Q9NR63 512 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 LRP2BPQ9P2M1 347 aa6□□□□□ -1.45
PPP4R1-227ENST00000583988 CDK11AQ9UQ88 783 aaPredicted RBP6□□□□□ -1.45
PPP4R1-227ENST00000583988 A0A1W2PQU0 124 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 C2orf71A6NGG8 1288 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 STXBP3O00186 592 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 AGRPO00253 132 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 INHBBP09529 407 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 BMP7P18075 431 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 TACR1P25103 407 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 NCKAP1LP55160 1127 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 IFRD2Q12894 506 aaPredicted RBP5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 LONRF2Q1L5Z9 754 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 EEF1DP3Q658K8 133 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 GTF2IRD2BQ6EKJ0 949 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 RCSD1Q6JBY9 416 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 GTF2IRD2Q86UP8 949 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 LDHDQ86WU2 507 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 ZNF227Q86WZ6 799 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 PPP1R14AQ96A00 147 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 MRFAP1L1Q96HT8 127 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 CCDC140Q96MF4 163 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 SRPK1Q96SB4 655 aaKnown RBP5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 LGR4Q9BXB1 951 aa5.99□□□□□ -1.45
PPP4R1-227ENST00000583988 HOXC12P31275 282 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 PLEKHN1Q494U1 663 aaPredicted RBP5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 LRRC47Q8N1G4 583 aaKnown RBP5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 COPS5Q92905 334 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 SNTG2Q9NY99 539 aa5.98□□□□□ -1.45
PPP4R1-227ENST00000583988 FAM221BA6H8Z2 402 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 TBX1O43435 398 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 L1CAMP32004 1257 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 SEPHS1P49903 392 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 NR1I3Q14994 352 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 LILRA6Q6PI73 481 aa5.97□□□□□ -1.45
PPP4R1-227ENST00000583988 ZC3H14Q6PJT7 736 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms