RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CLUL1Q15846 466 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 C12orf60Q5U649 245 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 GOPCQ9HD26 462 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
NUP85-224ENST00000583948 LINC01553A4QN01 128 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 GOLIM4O00461 696 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 RGS20O76081 388 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 IRS1P35568 1242 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
NUP85-224ENST00000583948 ZBED2Q9BTP6 218 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 KANSL2Q9H9L4 492 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
NUP85-224ENST00000583948 SIP14410 1827 aa13.66□□□□□ -0.22
NUP85-224ENST00000583948 DCHS1Q96JQ0 3298 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 GREB1LQ9C091 1923 aaPredicted RBP13.65□□□□□ -0.22
NUP85-224ENST00000583948 MYH4Q9Y623 1939 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 KIF28PB7ZC32 967 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 ZBED4O75132 1171 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 CABYRO75952 493 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 ACTN1P12814 892 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 PDE4AP27815 886 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 COPB2P35606 906 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 ZP2Q05996 745 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 MUM1L1Q5H9M0 696 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 AACSQ86V21 672 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
NUP85-224ENST00000583948 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
NUP85-224ENST00000583948 PHOSPHO2Q8TCD6 241 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 COPS5Q92905 334 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 IL1RAPL2Q9NP60 686 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
NUP85-224ENST00000583948 DMDP11532 3685 aa13.65□□□□□ -0.23
NUP85-224ENST00000583948 CSPG5O95196 566 aa13.64□□□□□ -0.23
NUP85-224ENST00000583948 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
NUP85-224ENST00000583948 TCF15Q12870 199 aa13.64□□□□□ -0.23
NUP85-224ENST00000583948 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
NUP85-224ENST00000583948 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
NUP85-224ENST00000583948 ATG2AQ2TAZ0 1938 aa13.64□□□□□ -0.23
NUP85-224ENST00000583948 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
NUP85-224ENST00000583948 PFKMP08237 780 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 ERVK-21P61565 698 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 CERS3Q8IU89 383 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 NEK9Q8TD19 979 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 ISY1Q9ULR0 285 aaKnown RBP13.63□□□□□ -0.23
NUP85-224ENST00000583948 WDR87Q6ZQQ6 2873 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
NUP85-224ENST00000583948 ATP2A1O14983 1001 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 ZEB2O60315 1214 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 PRDM1O75626 825 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 ALAS1P13196 640 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 RASA1P20936 1047 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 KCNJ6P48051 423 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 DLX2Q07687 328 aaPredicted RBP13.62□□□□□ -0.23
NUP85-224ENST00000583948 TCEAL5Q5H9L2 206 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
NUP85-224ENST00000583948 RETREG2Q8NC44 543 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
NUP85-224ENST00000583948 TGS1Q96RS0 853 aaKnown RBP13.62□□□□□ -0.23
NUP85-224ENST00000583948 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
NUP85-224ENST00000583948 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
NUP85-224ENST00000583948 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 ST18O60284 1047 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 GFRA3O60609 400 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 NBNO60934 754 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
NUP85-224ENST00000583948 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 SUPT20HL2P0C7V6 817 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUP85-224ENST00000583948 LTBRP36941 435 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUP85-224ENST00000583948 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 OR6J1Q8NGC5 347 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 WNT8BQ93098 351 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 OSBPL7Q9BZF2 842 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 WDR11Q9BZH6 1224 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
NUP85-224ENST00000583948 SLC4A4Q9Y6R1 1079 aa13.6□□□□□ -0.23
NUP85-224ENST00000583948 COL4A6Q14031 1691 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms