RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 EXOC6BQ9Y2D4 811 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 ELP1O95163 1332 aa6.42□□□□□ -1.38
VAPA-207ENST00000583879 DNAJC25-GNG10A0A024R161 153 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 GRXCR1A8MXD5 290 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 USP17L12C9JPN9 530 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 USP17L21D6R901 530 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 H3BM21 787 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 GOLIM4O00461 696 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 SIAH2O43255 324 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 PRKAB2O43741 272 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 DUSP11O75319 330 aaKnown RBP6.41□□□□□ -1.38
VAPA-207ENST00000583879 ASGR1P07306 291 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 PPIGQ13427 754 aaKnown RBP eCLIP6.41□□□□□ -1.38
VAPA-207ENST00000583879 HSP90AB4PQ58FF6 505 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 TMEM240Q5SV17 173 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 AKNAD1Q5T1N1 836 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 RASIP1Q5U651 963 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 CEP85Q6P2H3 762 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 ITPRIPQ8IWB1 547 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 CLASRPQ8N2M8 674 aaKnown RBP6.41□□□□□ -1.38
VAPA-207ENST00000583879 TMEM199Q8N511 208 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 PCSK9Q8NBP7 692 aaKnown RBP6.41□□□□□ -1.38
VAPA-207ENST00000583879 REPS2Q8NFH8 660 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 RHPN1Q8TCX5 695 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 PPM1EQ8WY54 764 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 HLA-CQ95604 372 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 VTI1AQ96AJ9 217 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 DDX11Q96FC9 970 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 GLT1D1Q96MS3 346 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 ASB2Q96Q27 587 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 GAS2L1Q99501 681 aaPredicted RBP6.41□□□□□ -1.38
VAPA-207ENST00000583879 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 ARMT1Q9H993 441 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 IL1RAPL2Q9NP60 686 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 TBX21Q9UL17 535 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 RIPK3Q9Y572 518 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 MROH7Q68CQ1 1323 aa6.41□□□□□ -1.38
VAPA-207ENST00000583879 MAST2Q6P0Q8 1798 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 CYP2D7A0A087X1C5 515 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 SMIM22K7EJ46 135 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 ARVCFO00192 962 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 HOXA2O43364 376 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 RAD21O60216 631 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 C6orf222P0C671 652 aaPredicted RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 RLBP1P12271 317 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 CSF2RAP15509 400 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 CST5P28325 142 aaPredicted RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 MRPS5P82675 430 aaKnown RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 ACVR2BQ13705 512 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 SLFNL1Q499Z3 407 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 GNASQ5JWF2 1037 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 FAM83BQ5T0W9 1011 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 CTR9Q6PD62 1173 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 CCDC129Q6ZRS4 1044 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 ZNF365Q70YC5 407 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 AMOTL1Q8IY63 956 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 FTSJ3Q8IY81 847 aaKnown RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 PRPF38AQ8NAV1 312 aaKnown RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 LENG1Q96BZ8 264 aaPredicted RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 DDRGK1Q96HY6 314 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 DNAJC2Q99543 621 aaKnown RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.4□□□□□ -1.38
VAPA-207ENST00000583879 TEX13BQ9BXU2 312 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 ABHD16BQ9H3Z7 469 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 PRDM12Q9H4Q4 367 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 GOPCQ9HD26 462 aa6.4□□□□□ -1.38
VAPA-207ENST00000583879 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.38
VAPA-207ENST00000583879 SYNGAP1Q96PV0 1343 aa6.4□□□□□ -1.39
VAPA-207ENST00000583879 SYNRGQ9UMZ2 1314 aa6.4□□□□□ -1.39
VAPA-207ENST00000583879 ROBO3Q96MS0 1386 aa6.4□□□□□ -1.39
VAPA-207ENST00000583879 PRUNE2Q8WUY3 3088 aa6.4□□□□□ -1.39
VAPA-207ENST00000583879 CDH23Q9H251 3354 aa6.4□□□□□ -1.39
VAPA-207ENST00000583879 SPTBN5Q9NRC6 3674 aaKnown RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 A0A0U1RQG5 324 aaPredicted RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 MYADML2A6NDP7 307 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 F5H6K3 240 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 ATP2A1O14983 1001 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 TLR3O15455 904 aaKnown RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 MBD4O95243 580 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 FGBP02675 491 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 IFIT2P09913 472 aaKnown RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 ACRP10323 421 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 IGFBP4P22692 258 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 ADD2P35612 726 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 GJA9P57773 515 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 NKX3-2P78367 333 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 KLRC3Q07444 240 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 ADGRE1Q14246 886 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 UBE3CQ15386 1083 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 AMHR2Q16671 573 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 SNRNP48Q6IEG0 339 aaKnown RBP6.39□□□□□ -1.39
VAPA-207ENST00000583879 FAM126BQ8IXS8 530 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 CPXCR1Q8N123 301 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms