RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SGPP1Q9BX95 441 aa5.71□□□□□ -1.5
VAPA-206ENST00000583475 GCM1Q9NP62 436 aa5.71□□□□□ -1.5
VAPA-206ENST00000583475 TRBV23OR9-2A0A075B6M9 112 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 ABLIM1O14639 778 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 GLDCP23378 1020 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 VIPR1P32241 457 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 RAP1GAPP47736 663 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 DLG4P78352 724 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
VAPA-206ENST00000583475 RAB3GAP1Q15042 981 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 PKN1Q16512 942 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 INF2Q27J81 1249 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 DENND5AQ6IQ26 1287 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 ATG14Q6ZNE5 492 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 DPF3Q92784 378 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 TRIM55Q9BYV6 548 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 FBLN5Q9UBX5 448 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 TMEFF2Q9UIK5 374 aaPredicted RBP5.7□□□□□ -1.5
VAPA-206ENST00000583475 MSRB2Q9Y3D2 182 aa5.7□□□□□ -1.5
VAPA-206ENST00000583475 DBX1A6NMT0 343 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 NUDT19A8MXV4 375 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 NFIBO00712 420 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 SEMA7AO75326 666 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 DBHP09172 617 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 TACR1P25103 407 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 ECI1P42126 302 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 PPP2R2AP63151 447 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 NR1I3Q14994 352 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 NBPF6Q5VWK0 638 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 RPTNQ6XPR3 784 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 CCDC103Q8IW40 242 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 ST13P5Q8NFI4 369 aaPredicted RBP5.69□□□□□ -1.5
VAPA-206ENST00000583475 ARMC5Q96C12 935 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 SGSM3Q96HU1 749 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 NBPF4Q96M43 638 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 CNTD2Q9H8S5 307 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 GULP1Q9UBP9 304 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 PPP1R1BQ9UD71 204 aaPredicted RBP5.69□□□□□ -1.5
VAPA-206ENST00000583475 MBD1Q9UIS9 605 aaPredicted RBP5.69□□□□□ -1.5
VAPA-206ENST00000583475 SMG5Q9UPR3 1016 aaKnown RBP5.69□□□□□ -1.5
VAPA-206ENST00000583475 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
VAPA-206ENST00000583475 A0A1W2PQJ5 194 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 AGRPO00253 132 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 SRGAP3O43295 1099 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 NPHS1O60500 1241 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 CPP00450 1065 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 CYBBP04839 570 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 SNRPB2P08579 225 aaKnown RBP5.68□□□□□ -1.5
VAPA-206ENST00000583475 GLI4P10075 376 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 GFRA1P56159 465 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 FZD5Q13467 585 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 PRSS53Q2L4Q9 553 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 BICRALQ6AI39 1079 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 IQCEQ6IPM2 695 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 PAQR3Q6TCH7 311 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 TMEM145Q8NBT3 493 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 PLEKHO2Q8TD55 490 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 C1orf159Q96HA4 380 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 HIRIP3Q9BW71 556 aaPredicted RBP5.68□□□□□ -1.5
VAPA-206ENST00000583475 CCDC113Q9H0I3 377 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 SIRT5Q9NXA8 310 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
VAPA-206ENST00000583475 KCNJ6P48051 423 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 MAPKAPK2P49137 400 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 TMEM62Q0P6H9 643 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 SERINC3Q13530 473 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 TESK1Q15569 626 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 SLC35F1Q5T1Q4 408 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 E4F1Q66K89 784 aaPredicted RBP5.67□□□□□ -1.5
VAPA-206ENST00000583475 ANKLE2Q86XL3 938 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.67□□□□□ -1.52e-8■■■■■ 29.4
VAPA-206ENST00000583475 SIRPGQ9P1W8 387 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 HCFC2Q9Y5Z7 792 aa5.67□□□□□ -1.5
VAPA-206ENST00000583475 ZC3H12DA2A288 527 aaKnown RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 IQCA1LA6NCM1 817 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 F8W031 263 aaPredicted RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 U2SURPO15042 1029 aaKnown RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 PDPK1O15530 556 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 DLX3O60479 287 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 FUCA1P04066 466 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 CDR1P51861 262 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 HSP90AA2PQ14568 343 aaPredicted RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 PLEKHN1Q494U1 663 aaPredicted RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 ACBD5Q5T8D3 534 aaPredicted RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 OLFML2BQ68BL8 750 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 TMC6Q7Z403 805 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 NPM2Q86SE8 214 aaKnown RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 LDHDQ86WU2 507 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 RCBTB1Q8NDN9 531 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 DIO2Q92813 273 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 ZNF669Q96BR6 464 aaPredicted RBP5.66□□□□□ -1.5
VAPA-206ENST00000583475 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 ARHGEF4Q9NR80 690 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms