RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 NCOA5Q9HCD5 579 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-219ENST00000583294 NDOR1Q9UHB4 597 aa8.13□□□□□ -1.11
SMARCE1-219ENST00000583294 TMEM59LQ9UK28 342 aa8.13□□□□□ -1.11
SMARCE1-219ENST00000583294 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMARCE1-219ENST00000583294 TRAF6Q9Y4K3 522 aa8.13□□□□□ -1.11
SMARCE1-219ENST00000583294 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 PAPLNO95428 1278 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 LCP1P13796 627 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 DUSP4Q13115 394 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 INF2Q27J81 1249 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 DIO2Q92813 273 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 FEZ1Q99689 392 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 ADAMTS6Q9UKP5 1117 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 ASXL2Q76L83 1435 aa8.12□□□□□ -1.11
SMARCE1-219ENST00000583294 SBNO2Q9Y2G9 1366 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 PLD2O14939 933 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 CEBPAP49715 358 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 GYS2P54840 703 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 ACBD5Q5T8D3 534 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 CYP2R1Q6VVX0 501 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 KIAA0907Q7Z7F0 614 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 JAMLQ86YT9 394 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 SYNPOQ8N3V7 929 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 DCAF4Q8WV16 495 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 LINC01599Q8WXQ3 324 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 PHF20Q9BVI0 1012 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 SLKQ9H2G2 1235 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 MBNL3Q9NUK0 354 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
SMARCE1-219ENST00000583294 TRBV23OR9-2A0A075B6M9 112 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 FADS2P1A8MWK0 482 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 LTBRP36941 435 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 GABREP78334 506 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 CEP128Q6ZU80 1094 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 SLC7A14Q8TBB6 771 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 PTPRN2Q92932 1015 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 JMJD8Q96S16 334 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 MMP19Q99542 508 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 MRPL4Q9BYD3 311 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 SFMBT1Q9UHJ3 866 aa8.1□□□□□ -1.11
SMARCE1-219ENST00000583294 MSCO60682 206 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 RTP1P59025 263 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 ERVFC1P60507 584 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 KCNAB2Q13303 367 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 IQCEQ6IPM2 695 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 DHX37Q8IY37 1157 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 RCBTB1Q8NDN9 531 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 BTG4Q9NY30 223 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 PCDHA2Q9Y5H9 948 aa8.09□□□□□ -1.11
SMARCE1-219ENST00000583294 C7orf72A4D263 438 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 FNDC3BQ53EP0 1204 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 DALRD3Q5D0E6 543 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 STYK1Q6J9G0 422 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 MAMDC2Q7Z304 686 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 BRAPQ7Z569 592 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 C19orf44Q9H6X5 657 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 RC3H2Q9HBD1 1191 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 NPFFR2Q9Y5X5 522 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 CARMIL2Q6F5E8 1435 aa8.08□□□□□ -1.12
SMARCE1-219ENST00000583294 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 NPHS1O60500 1241 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 CANXP27824 592 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 TRHRP34981 398 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 KIR2DL1P43626 348 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 KIR2DL2P43627 348 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 KIR3DS1Q14943 382 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 OXR1Q8N573 874 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 ANKS4BQ8N8V4 417 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 PDZD8Q8NEN9 1154 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 GPR27Q9NS67 375 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 GULP1Q9UBP9 304 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 PCDHA9Q9Y5H5 950 aa8.07□□□□□ -1.12
SMARCE1-219ENST00000583294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 CRTAMO95727 393 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 SDSP20132 328 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 GUCY1A3Q02108 690 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 TESK1Q15569 626 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 HSF5Q4G112 596 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 TRIM61Q5EBN2 209 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 FGD2Q7Z6J4 655 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 MTDHQ86UE4 582 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 SPPL2CQ8IUH8 684 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 NIM1KQ8IY84 436 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 IFNL3Q8IZI9 196 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 POU5F2Q8N7G0 328 aa8.06□□□□□ -1.12
SMARCE1-219ENST00000583294 DPF3Q92784 378 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms