RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 HCFC2Q9Y5Z7 792 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 NPHP3-ACAD11A0A0J9YXS1 232 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 ZC3H12DA2A288 527 aaKnown RBP6.65□□□□□ -1.34
COPS3-217ENST00000583160 BUB1BO60566 1050 aaPredicted RBP6.65□□□□□ -1.34
COPS3-217ENST00000583160 PAMP19021 973 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 ZNF200P98182 395 aaPredicted RBP6.65□□□□□ -1.34
COPS3-217ENST00000583160 LARP1BQ659C4 914 aaKnown RBP6.65□□□□□ -1.34
COPS3-217ENST00000583160 POMZP3Q6PJE2 187 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 C6orf15Q6UXA7 325 aaPredicted RBP6.65□□□□□ -1.34
COPS3-217ENST00000583160 TMEM151BQ8IW70 566 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.65□□□□□ -1.344e-6■□□□□ 10.2
COPS3-217ENST00000583160 PRKAG3Q9UGI9 489 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 RWDD3Q9Y3V2 267 aa6.65□□□□□ -1.34
COPS3-217ENST00000583160 TRBV23OR9-2A0A075B6M9 112 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 PPP1R11O60927 126 aaPredicted RBP6.64□□□□□ -1.35
COPS3-217ENST00000583160 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
COPS3-217ENST00000583160 SCRN1Q12765 414 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 LCE1DQ5T752 114 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 CNKSR3Q6P9H4 555 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 TRIM59Q8IWR1 403 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 FAM178BQ8IXR5 827 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 COPS5Q92905 334 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 DACT3Q96B18 629 aaPredicted RBP6.64□□□□□ -1.35
COPS3-217ENST00000583160 LGR4Q9BXB1 951 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 GPRC5CQ9NQ84 441 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 CLEC1BQ9P126 229 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
COPS3-217ENST00000583160 IRS2Q9Y4H2 1338 aa6.64□□□□□ -1.35
COPS3-217ENST00000583160 GLI4P10075 376 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 PFKLP17858 780 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 BMP7P18075 431 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 AFF3P51826 1226 aaKnown RBP6.63□□□□□ -1.35
COPS3-217ENST00000583160 PRR5P85299 388 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 ARID5AQ03989 594 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 GTF2IRD2BQ6EKJ0 949 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 TTLL10Q6ZVT0 673 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 GTF2IRD2Q86UP8 949 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 FAM129CQ86XR2 697 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 MRGPRX3Q96LB0 322 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 TINF2Q9BSI4 451 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 GULP1Q9UBP9 304 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 FBLN5Q9UBX5 448 aa6.63□□□□□ -1.35
COPS3-217ENST00000583160 C7orf72A4D263 438 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 B2RBV5 119 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 NPHS1O60500 1241 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 DDAH1O94760 285 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 INHBBP09529 407 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 FGRP09769 529 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 PLS3P13797 630 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 SV2CQ496J9 727 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 CABP7Q86V35 215 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 MTA3Q9BTC8 594 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 CYP26B1Q9NR63 512 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
COPS3-217ENST00000583160 THBDP07204 575 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 DNAJA1P31689 397 aaKnown RBP6.61□□□□□ -1.35
COPS3-217ENST00000583160 TARBP2Q15633 366 aaKnown RBP6.61□□□□□ -1.35
COPS3-217ENST00000583160 FXNQ16595 210 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 VMACQ2NL98 169 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 MICAL1Q8TDZ2 1067 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 PWWP2AQ96N64 755 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 MMP19Q99542 508 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 NKX2-4Q9H2Z4 354 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 LRP2BPQ9P2M1 347 aa6.61□□□□□ -1.35
COPS3-217ENST00000583160 SUSD5O60279 629 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 FBLN1P23142 703 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 IGFBP6P24592 240 aaPredicted RBP6.6□□□□□ -1.35
COPS3-217ENST00000583160 LIMS1P48059 325 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 MBLAC2Q68D91 279 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 MCF2L2Q86YR7 1114 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 MARCH10Q8NA82 808 aaPredicted RBP6.6□□□□□ -1.35
COPS3-217ENST00000583160 NETO2Q8NC67 525 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 BTN2A2Q8WVV5 523 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 ZCCHC4Q9H5U6 513 aa6.6□□□□□ -1.35
COPS3-217ENST00000583160 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.351e-6■■□□□ 13.5
COPS3-217ENST00000583160 TBX1O43435 398 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 TRIM13O60858 407 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 FUCA1P04066 466 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 ITGAVP06756 1048 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 NCAM1P13591 858 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 CYP4F3Q08477 520 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 INF2Q27J81 1249 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 MRM1Q6IN84 353 aaKnown RBP6.59□□□□□ -1.35
COPS3-217ENST00000583160 FRS2Q8WU20 508 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 ALG3Q92685 438 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 PEX11GQ96HA9 241 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 PARD6AQ9NPB6 346 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 RAPGEFL1Q9UHV5 662 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 NUDT5Q9UKK9 219 aa6.59□□□□□ -1.35
COPS3-217ENST00000583160 ATF2P15336 505 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 HOXA5P20719 270 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 HOXC12P31275 282 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 FOXO4P98177 505 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms