RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.03
GGA3-214ENST00000582717 STYK1Q6J9G0 422 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 HHIPL2Q6UWX4 724 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 CCDC148Q8NFR7 591 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 IPO4Q8TEX9 1081 aaKnown RBP15.27■□□□□ 0.03
GGA3-214ENST00000582717 TEKT1Q969V4 418 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 PCDHA6Q9UN73 950 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 PCDHA8Q9Y5H6 950 aa15.27■□□□□ 0.03
GGA3-214ENST00000582717 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 H0YIN7 160 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 ARHGAP25P42331 645 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 STX17P56962 302 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 AMPD2Q01433 879 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 NFIAQ12857 509 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
GGA3-214ENST00000582717 ABHD10Q9NUJ1 306 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 MYO6Q9UM54 1294 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 PCDHAC2Q9Y5I4 1007 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 A0A0U1RQJ8 604 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 CRKP46108 304 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 C10orf67Q8IYJ2 551 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 C4orf32Q8N8J7 132 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 ATRIPQ8WXE1 791 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 LCMT1Q9UIC8 334 aa15.26■□□□□ 0.03
GGA3-214ENST00000582717 SIPA1L1O43166 1804 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 SLURP2P0DP57 97 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 AFMP43652 599 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 AARSP49588 968 aaKnown RBP eCLIP15.25■□□□□ 0.03
GGA3-214ENST00000582717 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
GGA3-214ENST00000582717 ERVK-24P63145 666 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 LRRC47Q8N1G4 583 aaKnown RBP15.25■□□□□ 0.03
GGA3-214ENST00000582717 CCDC102AQ96A19 550 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 SERPINB13Q9UIV8 391 aa15.25■□□□□ 0.03
GGA3-214ENST00000582717 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
GGA3-214ENST00000582717 CCDC194A0A1B0GVG4 234 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 N4BP3O15049 544 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 PDHBP11177 359 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 CASP1P29466 404 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 SHMT1P34896 483 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 KRT31Q15323 416 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 EZH2Q15910 746 aaKnown RBP15.24■□□□□ 0.03
GGA3-214ENST00000582717 KIAA0825Q8IV33 1275 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 RWDD2AQ9UIY3 292 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 FRMPD2Q68DX3 1309 aaPredicted RBP15.24■□□□□ 0.03
GGA3-214ENST00000582717 ECE2O60344 883 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 N4BP1O75113 896 aaKnown RBP15.24■□□□□ 0.03
GGA3-214ENST00000582717 NAPAP54920 295 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 INF2Q27J81 1249 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 GALNT17Q6IS24 598 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 ZFPM1Q8IX07 1006 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 PIGSQ96S52 555 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
GGA3-214ENST00000582717 TRIM66O15016 1216 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
GGA3-214ENST00000582717 E2F4Q16254 413 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
GGA3-214ENST00000582717 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 NUP88Q99567 741 aaPredicted RBP15.23■□□□□ 0.03
GGA3-214ENST00000582717 ZMYND12Q9H0C1 365 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 PSMD14O00487 310 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 SMARCA1P28370 1054 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 CACNB3P54284 484 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 EN1Q05925 392 aaPredicted RBP15.23■□□□□ 0.03
GGA3-214ENST00000582717 STRIP1Q5VSL9 837 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 ARL6IP4Q66PJ3 421 aaKnown RBP15.23■□□□□ 0.03
GGA3-214ENST00000582717 TMEM60Q9H2L4 133 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
GGA3-214ENST00000582717 MYO3BQ8WXR4 1341 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 MYH4Q9Y623 1939 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 TARSL2A2RTX5 802 aaKnown RBP15.22■□□□□ 0.03
GGA3-214ENST00000582717 CCT6AP40227 531 aaKnown RBP15.22■□□□□ 0.03
GGA3-214ENST00000582717 MAGEA9P43362 315 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 USP14P54578 494 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 TRAPPC11Q7Z392 1133 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 NOA1Q8NC60 698 aaKnown RBP15.22■□□□□ 0.03
GGA3-214ENST00000582717 RIOX1Q9H6W3 641 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 RGS17Q9UGC6 210 aaPredicted RBP15.22■□□□□ 0.03
GGA3-214ENST00000582717 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 SNHG28P0DPA3 235 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 KRT9P35527 623 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 CKAP4Q07065 602 aaKnown RBP15.22■□□□□ 0.03
GGA3-214ENST00000582717 PAK1Q13153 545 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 EHBP1Q8NDI1 1231 aa15.22■□□□□ 0.03
GGA3-214ENST00000582717 C7orf43Q8WVR3 580 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms