RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	TNN	Q9UQP3	1299 aa		12.83	□□□□□ -0.36
NCOR1-222	ENST00000582565	SLC45A1	Q9Y2W3	748 aa		12.83	□□□□□ -0.36
NCOR1-222	ENST00000582565	SOWAHD	A6NJG2	315 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	TRIM75P	A6NK02	468 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	SRGAP3	O43295	1099 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	ADCY3	O60266	1144 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	CT47B1	P0C2W7	299 aa	Predicted RBP	12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	MAPT	P10636	758 aa	Known RBP	12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	ARSD	P51689	593 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	TNP2	Q05952	138 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	GPR161	Q8N6U8	529 aa	Known RBP	12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	U2AF1L4	Q8WU68	220 aa	Known RBP	12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	DPF3	Q92784	378 aa		12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	BIN2	Q9UBW5	565 aa	Predicted RBP	12.82	□□□□□ -0.36
NCOR1-222	ENST00000582565	SIPA1L1	O43166	1804 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	ATAD5	Q96QE3	1844 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	ZBTB39	O15060	712 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	EFS	O43281	561 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	ZAP70	P43403	619 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	UBXN2A	P68543	259 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	NSUN4	Q96CB9	384 aa	Known RBP	12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	AGTPBP1	Q9UPW5	1226 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	ALPK3	Q96L96	1907 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	LAMA3	Q16787	3333 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	LOC285556	D6RIA3	1793 aa		12.81	□□□□□ -0.36
NCOR1-222	ENST00000582565	WFS1	O76024	890 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	EPB42	P16452	691 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	NPR3	P17342	541 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	FGFR3	P22607	806 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	MVP	Q14764	893 aa	Known RBP	12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	ANKRD13C	Q8N6S4	541 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	SPATA5	Q8NB90	893 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	ARHGAP45	Q92619	1136 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	HDAC5	Q9UQL6	1122 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	AKAP2	Q9Y2D5	859 aa		12.8	□□□□□ -0.36
NCOR1-222	ENST00000582565	PLXNB2	O15031	1838 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	PNMA6E	A0A0J9YXQ4	647 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	TNPO2	O14787	897 aa	Known RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	FARP2	O94887	1054 aa	Predicted RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	CD33	P20138	364 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	MCAM	P43121	646 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	EIF1AX	P47813	144 aa	Known RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	JAG1	P78504	1218 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	SPP2	Q13103	211 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	LAMC2	Q13753	1193 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	ALKBH2	Q6NS38	261 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	NEUROD6	Q96NK8	337 aa		12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	PAK6	Q9NQU5	681 aa	Predicted RBP	12.79	□□□□□ -0.36
NCOR1-222	ENST00000582565	COL2A1	P02458	1487 aa	Predicted RBP	12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	CDK5RAP2	Q96SN8	1893 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	GNAI3	P08754	354 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	AAMP	Q13685	434 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	GAS6	Q14393	721 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	ATCAY	Q86WG3	371 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	DEFB118	Q96PH6	123 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	HTATIP2	Q9BUP3	242 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	FAM13B	Q9NYF5	915 aa		12.78	□□□□□ -0.36
NCOR1-222	ENST00000582565	OPLAH	O14841	1288 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	PEX10	O60683	326 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	TRIM27	P14373	513 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	CAP2	P40123	477 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	HMGCS2	P54868	508 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	SFSWAP	Q12872	951 aa	Known RBP	12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	FAM110C	Q1W6H9	321 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	RGL4	Q8IZJ4	473 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	DIS3L	Q8TF46	1054 aa	Known RBP	12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	RAI14	Q9P0K7	980 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	MARK1	Q9P0L2	795 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	GJD2	Q9UKL4	321 aa		12.77	□□□□□ -0.37
NCOR1-222	ENST00000582565	BCAR3	O75815	825 aa		12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	MAP4K4	O95819	1239 aa	Predicted RBP	12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	TFRC	P02786	760 aa	Known RBP	12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	LDHC	P07864	332 aa		12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	ADGRA1	Q86SQ6	560 aa		12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	TEX11	Q8IYF3	940 aa		12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	DNAJC18	Q9H819	358 aa		12.76	□□□□□ -0.37
NCOR1-222	ENST00000582565	GNAI2	P04899	355 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	MX2	P20592	715 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	GSTO1	P78417	241 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	FOCAD	Q5VW36	1801 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	TREML4	Q6UXN2	200 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	GPR152	Q8TDT2	470 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	COA7	Q96BR5	231 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	PAWR	Q96IZ0	340 aa	Known RBP	12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	USP20	Q9Y2K6	914 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	NR2E3	Q9Y5X4	410 aa		12.75	□□□□□ -0.37
NCOR1-222	ENST00000582565	SOX1	O00570	391 aa	Predicted RBP	12.74	□□□□□ -0.37
NCOR1-222	ENST00000582565	GCLC	P48506	637 aa	Predicted RBP	12.74	□□□□□ -0.37
NCOR1-222	ENST00000582565	RNFT1	Q5M7Z0	435 aa		12.74	□□□□□ -0.37
NCOR1-222	ENST00000582565	GORAB	Q5T7V8	394 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms