RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 USP17L21D6R901 530 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 DCXO43602 365 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 SURF6O75683 361 aaKnown RBP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 CDK8P49336 464 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 BEX3Q00994 111 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 FAM83BQ5T0W9 1011 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 SLC9C2Q5TAH2 1124 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 KRT40Q6A162 431 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 CLEC10AQ8IUN9 316 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 EAF2Q96CJ1 260 aaPredicted RBP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 SCLYQ96I15 445 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 PRRX2Q99811 253 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 UBE2ZQ9H832 354 aaPredicted RBP7.49□□□□□ -1.21
TVP23B-210ENST00000582288 CERS4Q9HA82 394 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 NYAP2Q9P242 653 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 PRKAG3Q9UGI9 489 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 FAM50BQ9Y247 325 aa7.49□□□□□ -1.21
TVP23B-210ENST00000582288 MUC6Q6W4X9 2439 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 LOC102724159A0A0B4J2E5 919 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 GRXCR2A6NFK2 248 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 F5H6K3 240 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 DYNC1LI2O43237 492 aaPredicted RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 KPNA6O60684 536 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 PARNO95453 639 aaKnown RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 IQCF3P0C7M6 154 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 PDE6AP16499 860 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 RARSP54136 660 aaKnown RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 KLRC3Q07444 240 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 BFSP2Q13515 415 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 PWP2Q15269 919 aaKnown RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 PKN1Q16512 942 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 NFRKBQ6P4R8 1299 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 RPAP2Q8IXW5 612 aaPredicted RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 SDR42E1Q8WUS8 393 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 DYNLL2Q96FJ2 89 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 MFSD14AQ96MC6 490 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 CCDC8Q9H0W5 538 aaPredicted RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 TLR7Q9NYK1 1049 aaKnown RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 FEM1BQ9UK73 627 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
TVP23B-210ENST00000582288 MYH8P13535 1937 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 ZNF536O15090 1300 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 ZNF532Q9HCE3 1301 aa7.48□□□□□ -1.21
TVP23B-210ENST00000582288 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 EFCAB14O75071 495 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ARHGEF15O94989 841 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 CYP2D6P10635 497 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 SMPD1P17405 629 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 CPT1AP50416 773 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ERVK-21P61565 698 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 TKFCQ3LXA3 575 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 DUSP28Q4G0W2 176 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 TAPT1Q6NXT6 567 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 DEFB128Q7Z7B8 93 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ERC1Q8IUD2 1116 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 CPXCR1Q8N123 301 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 LCORLQ8N3X6 602 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ANKK1Q8NFD2 765 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 NEK9Q8TD19 979 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 MORC4Q8TE76 937 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 MKL1Q969V6 931 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 RAD9AQ99638 391 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 UPF3BQ9BZI7 483 aaKnown RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ACAD9Q9H845 621 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 SUGCTQ9HAC7 445 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 VTA1Q9NP79 307 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 COL4A4P53420 1690 aaPredicted RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 ZBED9Q6R2W3 1325 aa7.47□□□□□ -1.21
TVP23B-210ENST00000582288 PRRC2BQ5JSZ5 2229 aaKnown RBP7.47□□□□□ -1.21
TVP23B-210ENST00000582288 GREB1LQ9C091 1923 aaPredicted RBP7.46□□□□□ -1.21
TVP23B-210ENST00000582288 SOWAHBA6NEL2 793 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 NDUFB10O96000 172 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 CYP2C9P11712 490 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 TRIM27P14373 513 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 KCNJ6P48051 423 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 PSMC6P62333 389 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 PURAQ00577 322 aaKnown RBP7.46□□□□□ -1.22
TVP23B-210ENST00000582288 COL19A1Q14993 1142 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.22
TVP23B-210ENST00000582288 BMP8AQ7Z5Y6 402 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 IFNLR1Q8IU57 520 aaPredicted RBP7.46□□□□□ -1.22
TVP23B-210ENST00000582288 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 AFAP1L1Q8TED9 768 aa7.46□□□□□ -1.22
TVP23B-210ENST00000582288 TGS1Q96RS0 853 aaKnown RBP7.46□□□□□ -1.22
TVP23B-210ENST00000582288 MTG1Q9BT17 334 aaPredicted RBP7.46□□□□□ -1.22
TVP23B-210ENST00000582288 RAVER2Q9HCJ3 691 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms