RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 AMOTL1Q8IY63 956 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
NF1-221ENST00000581790 WASF1Q92558 559 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 UBAC1Q9BSL1 405 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 TMX4Q9H1E5 349 aaPredicted RBP7.54□□□□□ -1.2
NF1-221ENST00000581790 TSPY26PQ9H489 355 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 ATP8A2Q9NTI2 1148 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 ZSWIM5Q9P217 1185 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
NF1-221ENST00000581790 PARP3Q9Y6F1 533 aa7.54□□□□□ -1.2
NF1-221ENST00000581790 STK36Q9NRP7 1315 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 BAZ2BQ9UIF8 2168 aaKnown RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 BAG3O95817 575 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 FDPSP14324 419 aaKnown RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 PRDX5P30044 214 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 ALDH1B1P30837 517 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 PDE6BP35913 854 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 IARSP41252 1262 aaKnown RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 SSRP1Q08945 709 aaKnown RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 TRIM29Q14134 588 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 PPP2R5BQ15173 497 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 ZNF827Q17R98 1081 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 FAM173BQ6P4H8 233 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 BRAPQ7Z569 592 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 IQCA1Q86XH1 822 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 RAB11FIP4Q86YS3 637 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 SP8Q8IXZ3 490 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 TBC1D22AQ8WUA7 517 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 LEO1Q8WVC0 666 aaPredicted RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 LENG1Q96BZ8 264 aaPredicted RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 AATFQ9NY61 560 aaKnown RBP eCLIP7.53□□□□□ -1.2
NF1-221ENST00000581790 TFIP11Q9UBB9 837 aaKnown RBP7.53□□□□□ -1.2
NF1-221ENST00000581790 ADAMTSL1Q8N6G6 1762 aa7.53□□□□□ -1.2
NF1-221ENST00000581790 A0A0A0MRY4 1105 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 IL1R1P14778 569 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 NPR1P16066 1061 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 USP5P45974 858 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 GUCY1B3Q02153 619 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 PDE4BQ07343 736 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 CCDC173Q0VFZ6 552 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 GNL2Q13823 731 aaKnown RBP7.52□□□□□ -1.21
NF1-221ENST00000581790 RTN1Q16799 776 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 SBK1Q52WX2 424 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 CTR9Q6PD62 1173 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 C20orf204Q6ZNR8 217 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
NF1-221ENST00000581790 STK11IPQ8N1F8 1099 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 FBXO18Q8NFZ0 1043 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 BICD2Q8TD16 824 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 SLC30A3Q99726 388 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 ALG1Q9BT22 464 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 CD209Q9NNX6 404 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 DCP1AQ9NPI6 582 aaPredicted RBP7.52□□□□□ -1.21
NF1-221ENST00000581790 DDX19AQ9NUU7 478 aaKnown RBP7.52□□□□□ -1.21
NF1-221ENST00000581790 USP3Q9Y6I4 520 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 ARFGEF1Q9Y6D6 1849 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 MROH7-TTC4A0A0A0MT08 1334 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 TNKSO95271 1327 aa7.52□□□□□ -1.21
NF1-221ENST00000581790 SCN9AQ15858 1988 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 USP17L12C9JPN9 530 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 USP17L21D6R901 530 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 ORC4O43929 436 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
NF1-221ENST00000581790 FGRP09769 529 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CALM1P0DP23 149 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CALM2P0DP24 149 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CALM3P0DP25 149 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 IFNAR1P17181 557 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 RXRAP19793 462 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CDC27P30260 824 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CCDC178Q5BJE1 867 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 IFIT1BQ5T764 474 aaKnown RBP7.51□□□□□ -1.21
NF1-221ENST00000581790 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 ZNF654Q8IZM8 581 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 MASTLQ96GX5 879 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
NF1-221ENST00000581790 ZKSCAN3Q9BRR0 538 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 PANK2Q9BZ23 570 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 NUP62CLQ9H1M0 184 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 INCENPQ9NQS7 918 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 RBM28Q9NW13 759 aaKnown RBP7.51□□□□□ -1.21
NF1-221ENST00000581790 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 ATP6V0A2Q9Y487 856 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 TACC3Q9Y6A5 838 aa7.51□□□□□ -1.21
NF1-221ENST00000581790 ROBO3Q96MS0 1386 aa7.5□□□□□ -1.21
NF1-221ENST00000581790 CYP2D7A0A087X1C5 515 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms