RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 RAVER2Q9HCJ3 691 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 FBXO40Q9UH90 709 aa15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 CCPG1Q9ULG6 757 aa15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 IVNS1ABPQ9Y6Y0 642 aa15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 MUC3AQ02505 3323 aa15.58■□□□□ 0.08
CSNK1D-220ENST00000581737 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 PDIA3P30101 505 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 CACNB2Q08289 660 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 CCL14Q16627 93 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 WDR78Q5VTH9 848 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 CPLX2Q6PUV4 134 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 PLEKHH3Q7Z736 793 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 NCAPG2Q86XI2 1143 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 CHST13Q8NET6 341 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 SOCS4Q8WXH5 440 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 RRP36Q96EU6 259 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 CPVLQ9H3G5 476 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 JMJD4Q9H9V9 463 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 SEC63Q9UGP8 760 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
CSNK1D-220ENST00000581737 ZBTB5O15062 677 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 PLEKHA8P1O95397 391 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 ERCC3P19447 782 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 NOL8Q76FK4 1167 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 FBXO11Q86XK2 927 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 USP6NLQ92738 828 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 PORCNQ9H237 461 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 SMC3Q9UQE7 1217 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 ZNF536O15090 1300 aa15.56■□□□□ 0.08
CSNK1D-220ENST00000581737 ABCB11O95342 1321 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 CPLX1O14810 134 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 STRNO43815 780 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 SNAP25P60880 206 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 QRICH1Q2TAL8 776 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 GPR142Q7Z601 462 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 HOMER1Q86YM7 354 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 ABRAQ8N0Z2 381 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 RNF146Q9NTX7 359 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
CSNK1D-220ENST00000581737 CNTNAP5Q8WYK1 1306 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 SLC15A5A6NIM6 579 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 CYTH3O43739 400 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 CDKL5O76039 1030 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 FCER1AP12319 257 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 ALAS1P13196 640 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 PDCP20941 246 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 KCTD2Q14681 263 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 AGBL1Q96MI9 1066 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 PIGSQ96S52 555 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 MAF1Q9H063 256 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 TPCN1Q9ULQ1 816 aa15.54■□□□□ 0.08
CSNK1D-220ENST00000581737 PFKFB2O60825 505 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 XRCC5P13010 732 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 PTPREP23469 700 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 CDC27P30260 824 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 ADD1P35611 737 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 CCT2P78371 535 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 STK3Q13188 491 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 SLC35G1Q2M3R5 365 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 MORN1Q5T089 497 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 TRIM22Q8IYM9 498 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 MMP19Q99542 508 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 NUDT12Q9BQG2 462 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 HOMER2Q9NSB8 354 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 FAM217BQ9NTX9 383 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 SLC5A4Q9NY91 659 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 MRPL11Q9Y3B7 192 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
CSNK1D-220ENST00000581737 hCG_1984214I3L0E3 225 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 IFNAR1P17181 557 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 RGS2P41220 211 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 FUT2Q10981 343 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 GRB14Q14449 540 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 USH1GQ495M9 461 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 CMTR1Q8N1G2 835 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 CCDC82Q8N4S0 544 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 ZNF713Q8N859 430 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 LARP6Q9BRS8 491 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 NCOA5Q9HCD5 579 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 FLRT1Q9NZU1 646 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 RIPK3Q9Y572 518 aa15.52■□□□□ 0.08
CSNK1D-220ENST00000581737 ZNFX1Q9P2E3 1918 aaKnown RBP15.52■□□□□ 0.07
CSNK1D-220ENST00000581737 SMCHD1A6NHR9 2005 aa15.51■□□□□ 0.07
CSNK1D-220ENST00000581737 MCM4P33991 863 aa15.51■□□□□ 0.07
CSNK1D-220ENST00000581737 MAP2K5Q13163 448 aa15.51■□□□□ 0.07
CSNK1D-220ENST00000581737 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-220ENST00000581737 MCF2L2Q86YR7 1114 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms