RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
DDX42-213ENST00000581477 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
DDX42-213ENST00000581477 RPAP3Q9H6T3 665 aaPredicted RBP8.19□□□□□ -1.1
DDX42-213ENST00000581477 VAT1LQ9HCJ6 419 aa8.19□□□□□ -1.1
DDX42-213ENST00000581477 BARHL2Q9NY43 387 aa8.19□□□□□ -1.1
DDX42-213ENST00000581477 TMOD4Q9NZQ9 345 aa8.19□□□□□ -1.1
DDX42-213ENST00000581477 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
DDX42-213ENST00000581477 SEC63Q9UGP8 760 aaKnown RBP8.19□□□□□ -1.1
DDX42-213ENST00000581477 MYPNQ86TC9 1320 aa8.19□□□□□ -1.1
DDX42-213ENST00000581477 USP17L15C9J2P7 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L13C9JLJ4 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L11C9JVI0 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L18D6R9N7 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 H3BQV1 296 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 STXBP3O00186 592 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 PPP1R11O60927 126 aaPredicted RBP8.18□□□□□ -1.1
DDX42-213ENST00000581477 F13A1P00488 732 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 MMP1P03956 469 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 U2AF2P26368 475 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■■□□□ 11.4
DDX42-213ENST00000581477 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 TRAF1Q13077 416 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 SNAPC2Q13487 334 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 DGKZQ13574 1117 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 TRIM29Q14134 588 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 COG2Q14746 738 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 NPY5RQ15761 445 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 CDC37Q16543 378 aaPredicted RBP8.18□□□□□ -1.1
DDX42-213ENST00000581477 QRICH1Q2TAL8 776 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 WWC2Q6AWC2 1192 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
DDX42-213ENST00000581477 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 ZMYND12Q9H0C1 365 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 ZSCAN16Q9H4T2 348 aaPredicted RBP8.18□□□□□ -1.1
DDX42-213ENST00000581477 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
DDX42-213ENST00000581477 GJB4Q9NTQ9 266 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 FBXO28Q9NVF7 368 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 HOXC10Q9NYD6 342 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 AGTPBP1Q9UPW5 1226 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
DDX42-213ENST00000581477 UTRNP46939 3433 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 M0R2N6 131 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TERTO14746 1132 aaKnown RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 ATP2A1O14983 1001 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 GDF9O60383 454 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 FLOT1O75955 427 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 CETPP11597 493 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 CALML3P27482 149 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 MLLT3P42568 568 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 GTF2A2P52657 109 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 HUNKP57058 714 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 KIF23Q02241 960 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 IKQ13123 557 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 RESTQ13127 1097 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 OTUD7BQ6GQQ9 843 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 RGMBQ6NW40 437 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 HOMER1Q86YM7 354 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 CCDC148Q8NFR7 591 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 PIBF1Q8WXW3 757 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TATDN2Q93075 761 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 AMNQ9BXJ7 453 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 FOXP1Q9H334 677 aaPredicted RBP8.17□□□□□ -1.1
DDX42-213ENST00000581477 SLC38A10Q9HBR0 1119 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 PNMA2Q9UL42 364 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 SLC45A1Q9Y2W3 748 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 ATP6V1DQ9Y5K8 247 aa8.17□□□□□ -1.1
DDX42-213ENST00000581477 TMEM88BA6NKF7 163 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 VWA5AO00534 786 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 ZNF536O15090 1300 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 ICAM1P05362 532 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 GNA11P29992 359 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 OAZ1P54368 228 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 NAPAP54920 295 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 NLRP5P59047 1200 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 GUCY1B3Q02153 619 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 PABPC4Q13310 644 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDX42-213ENST00000581477 SAFBQ15424 915 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDX42-213ENST00000581477 TREML2Q5T2D2 321 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 HEATR3Q7Z4Q2 680 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
DDX42-213ENST00000581477 RASAL3Q86YV0 1011 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms