RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 PCSK9Q8NBP7 692 aaKnown RBP18.54■□□□□ 0.56
ATG13-227ENST00000581416 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 KRT23Q9C075 422 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 KAT14Q9H8E8 782 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 SENP2Q9HC62 589 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 CTNNA3Q9UI47 895 aa18.54■□□□□ 0.56
ATG13-227ENST00000581416 EDNRBP24530 442 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 CALML3P27482 149 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 USH1GQ495M9 461 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 RNF207Q6ZRF8 634 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 ADGRF4Q8IZF3 695 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 STAG2Q8N3U4 1231 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 DEFB123Q8N688 67 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 PTPRSQ13332 1948 aa18.53■□□□□ 0.56
ATG13-227ENST00000581416 RBM47A0AV96 593 aaKnown RBP18.52■□□□□ 0.56
ATG13-227ENST00000581416 ARVCFO00192 962 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 SGSM2O43147 1006 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 DYNC1LI2O43237 492 aaPredicted RBP18.52■□□□□ 0.56
ATG13-227ENST00000581416 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
ATG13-227ENST00000581416 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 ASPRV1Q53RT3 343 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 IQSEC1Q6DN90 963 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 CXCL17Q6UXB2 119 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 SKAP1Q86WV1 359 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 SLC43A3Q8NBI5 491 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 CNNM2Q9H8M5 875 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 SPC25Q9HBM1 224 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 MTMR10Q9NXD2 777 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 COL20A1Q9P218 1284 aa18.52■□□□□ 0.56
ATG13-227ENST00000581416 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.55
ATG13-227ENST00000581416 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
ATG13-227ENST00000581416 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
ATG13-227ENST00000581416 OPLAHO14841 1288 aa18.51■□□□□ 0.55
ATG13-227ENST00000581416 CD4P01730 458 aa18.51■□□□□ 0.55
ATG13-227ENST00000581416 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
ATG13-227ENST00000581416 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
ATG13-227ENST00000581416 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
ATG13-227ENST00000581416 TMEM39AQ9NV64 488 aa18.51■□□□□ 0.55
ATG13-227ENST00000581416 ADD3Q9UEY8 706 aaKnown RBP18.51■□□□□ 0.55
ATG13-227ENST00000581416 PPP1R11O60927 126 aaPredicted RBP18.5■□□□□ 0.55
ATG13-227ENST00000581416 RAG1P15918 1043 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 DUSP28Q4G0W2 176 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
ATG13-227ENST00000581416 MTMR8Q96EF0 704 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 MAD2L2Q9UI95 211 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 Q9Y3F1 56 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 PRUNE2Q8WUY3 3088 aa18.5■□□□□ 0.55
ATG13-227ENST00000581416 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 ARIH2O95376 493 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 TIMP1P01033 207 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 PARP1P09874 1014 aaKnown RBP18.49■□□□□ 0.55
ATG13-227ENST00000581416 ANTXR2P58335 489 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 PSMC6P62333 389 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
ATG13-227ENST00000581416 RGS22Q8NE09 1264 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 COPS5Q92905 334 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 GUCD1Q96NT3 240 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 ABCB11O95342 1321 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
ATG13-227ENST00000581416 PALM3A6NDB9 673 aaPredicted RBP18.48■□□□□ 0.55
ATG13-227ENST00000581416 E7EWF7 191 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 C16orf59Q7L2K0 433 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 DNERQ8NFT8 737 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
ATG13-227ENST00000581416 RUFY2Q8WXA3 655 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 TAAR1Q96RJ0 339 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 CHD7Q9P2D1 2997 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 UMODL1Q5DID0 1318 aa18.48■□□□□ 0.55
ATG13-227ENST00000581416 FPGSQ05932 587 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 FAM109BQ6ICB4 259 aaPredicted RBP18.47■□□□□ 0.55
ATG13-227ENST00000581416 CHST3Q7LGC8 479 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 MB21D2Q8IYB1 491 aaPredicted RBP18.47■□□□□ 0.55
ATG13-227ENST00000581416 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 VTI1AQ96AJ9 217 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 VAT1LQ9HCJ6 419 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
ATG13-227ENST00000581416 A0A0C4DFX4 3053 aa18.47■□□□□ 0.55
ATG13-227ENST00000581416 REV3LO60673 3130 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 CYTH3O43739 400 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 PDE4DQ08499 809 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 GRM4Q14833 912 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 MFSD5Q6N075 450 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 FBXO11Q86XK2 927 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG13-227ENST00000581416 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.55
ATG13-227ENST00000581416 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
ATG13-227ENST00000581416 RBM8AQ9Y5S9 174 aaKnown RBP18.46■□□□□ 0.55
ATG13-227ENST00000581416 KLRF2D3W0D1 207 aa18.45■□□□□ 0.54
ATG13-227ENST00000581416 B4GALT4O60513 344 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms