RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 DIO2Q92813 273 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 OSBP2Q969R2 916 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 SHISA4Q96DD7 197 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 C1orf159Q96HA4 380 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 MMP19Q99542 508 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 GULP1Q9UBP9 304 aa6.62□□□□□ -1.35
NF1-220ENST00000581113 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
NF1-220ENST00000581113 YBX2Q9Y2T7 364 aaKnown RBP6.62□□□□□ -1.35
NF1-220ENST00000581113 A0A1W2PQJ5 194 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 C7orf72A4D263 438 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 CYP4F8P98187 520 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 INF2Q27J81 1249 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 FAM209AQ5JX71 171 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 SLC35F1Q5T1Q4 408 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 FOXB2Q5VYV0 432 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
NF1-220ENST00000581113 IQCEQ6IPM2 695 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 THAP3Q8WTV1 239 aaPredicted RBP6.61□□□□□ -1.35
NF1-220ENST00000581113 LIN37Q96GY3 246 aaPredicted RBP6.61□□□□□ -1.35
NF1-220ENST00000581113 BTG4Q9NY30 223 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 ACSL6Q9UKU0 697 aa6.61□□□□□ -1.35
NF1-220ENST00000581113 TRBV23-1A0A0A0MS06 115 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 NPHS1O60500 1241 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 MSL3P1P0C860 447 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 TACR1P25103 407 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 ARL4AP40617 200 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 MVKQ03426 396 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 KCNAB2Q13303 367 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 C2orf27AQ580R0 203 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 ADGRF1Q5T601 910 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
NF1-220ENST00000581113 SCUBE1Q8IWY4 988 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 INTS4Q96HW7 963 aaKnown RBP6.6□□□□□ -1.35
NF1-220ENST00000581113 SLC6A17Q9H1V8 727 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 CRTAC1Q9NQ79 661 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 RWDD3Q9Y3V2 267 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 BLACEA4D250 179 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 ARNTLO00327 626 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 SDHBP21912 280 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 PDE6BP35913 854 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 LTBRP36941 435 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 CORO7P57737 925 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 LONRF2Q1L5Z9 754 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 EXOC2Q96KP1 924 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 PDLIM7Q9NR12 457 aa6.6□□□□□ -1.35
NF1-220ENST00000581113 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.59□□□□□ -1.36
NF1-220ENST00000581113 MYO1BO43795 1136 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 LCP1P13796 627 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 PNLIPP16233 465 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 BICRALQ6AI39 1079 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 LZTR1Q8N653 840 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 ZSWIM2Q8NEG5 633 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 USP33Q8TEY7 942 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 SLC26A8Q96RN1 970 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 DHRS4Q9BTZ2 278 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 PTCH2Q9Y6C5 1203 aa6.59□□□□□ -1.36
NF1-220ENST00000581113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.36
NF1-220ENST00000581113 LRRC10BA6NIK2 292 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 PPP1R11O60927 126 aaPredicted RBP6.58□□□□□ -1.36
NF1-220ENST00000581113 SUMO1P63165 101 aaKnown RBP6.58□□□□□ -1.36
NF1-220ENST00000581113 NTRK3Q16288 839 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 JMYQ8N9B5 988 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 RCBTB1Q8NDN9 531 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 NLGN2Q8NFZ4 835 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 CHAMP1Q96JM3 812 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 DIRC2Q96SL1 478 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 PHF20Q9BVI0 1012 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 KANSL2Q9H9L4 492 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 MRPS23Q9Y3D9 190 aaKnown RBP6.58□□□□□ -1.36
NF1-220ENST00000581113 PCDHA2Q9Y5H9 948 aa6.58□□□□□ -1.36
NF1-220ENST00000581113 TIMM13Q9Y5L4 95 aaPredicted RBP6.58□□□□□ -1.36
NF1-220ENST00000581113 FUCA1P04066 466 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 RPL11P62913 178 aaKnown RBP6.57□□□□□ -1.36
NF1-220ENST00000581113 TESK1Q15569 626 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 MLANAQ16655 118 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 ZC3H12BQ5HYM0 836 aaKnown RBP6.57□□□□□ -1.36
NF1-220ENST00000581113 KCNT2Q6UVM3 1135 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 DCAF4Q8WV16 495 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 DPF3Q92784 378 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
NF1-220ENST00000581113 FAM53CQ9NYF3 392 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
NF1-220ENST00000581113 FBLN5Q9UBX5 448 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 NPFFR2Q9Y5X5 522 aa6.57□□□□□ -1.36
NF1-220ENST00000581113 OR14I1A6ND48 311 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 NUDT19A8MXV4 375 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 BCL6P41182 706 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 PRR23BQ6ZRT6 265 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 CABP7Q86V35 215 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 IRF2BP1Q8IU81 584 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 TEX2Q8IWB9 1127 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 TNFRSF12AQ9NP84 129 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 GPR27Q9NS67 375 aa6.56□□□□□ -1.36
NF1-220ENST00000581113 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.56□□□□□ -1.363e-7■□□□□ 9.5
NF1-220ENST00000581113 MPOP05164 745 aa6.55□□□□□ -1.36
NF1-220ENST00000581113 FPR2P25090 351 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms