RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 KIAA1211Q6ZU35 1233 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 AP5M1Q9H0R1 490 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 CYP21A2P08686 494 aa24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 PARP1P09874 1014 aaKnown RBP24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 SEC23AQ15436 765 aa24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 CDC37Q16543 378 aaPredicted RBP24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 C9orf50Q5SZB4 431 aa24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 IFIT1BQ5T764 474 aaKnown RBP24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 Q7L0L9 218 aa24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 VAT1LQ9HCJ6 419 aa24.89■■□□□ 1.58
CSNK1D-216ENST00000581108 SGSM2O43147 1006 aa24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 RAG1P15918 1043 aa24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 FSCN1Q16658 493 aaKnown RBP24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 CXCL17Q6UXB2 119 aa24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 DEFB123Q8N688 67 aa24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 U3KPZ7 1027 aaPredicted RBP24.88■■□□□ 1.57
CSNK1D-216ENST00000581108 LOC102724159A0A0B4J2E5 919 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 A0A0U1RQG5 324 aaPredicted RBP24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 ARVCFO00192 962 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 TRDNQ13061 729 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 PWP2Q15269 919 aaKnown RBP24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 STAG2Q8N3U4 1231 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 TBC1D5Q92609 795 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 JMJD4Q9H9V9 463 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 Q9Y3F1 56 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 TAF6LQ9Y6J9 622 aa24.87■■□□□ 1.57
CSNK1D-216ENST00000581108 DHX16O60231 1041 aaKnown RBP24.86■■□□□ 1.57
CSNK1D-216ENST00000581108 QRICH1Q2TAL8 776 aa24.86■■□□□ 1.57
CSNK1D-216ENST00000581108 RGS22Q8NE09 1264 aa24.86■■□□□ 1.57
CSNK1D-216ENST00000581108 WDR11Q9BZH6 1224 aa24.86■■□□□ 1.57
CSNK1D-216ENST00000581108 MROH7Q68CQ1 1323 aa24.86■■□□□ 1.57
CSNK1D-216ENST00000581108 EPHB4P54760 987 aa24.85■■□□□ 1.57
CSNK1D-216ENST00000581108 PDE4DQ08499 809 aa24.85■■□□□ 1.57
CSNK1D-216ENST00000581108 DUSP28Q4G0W2 176 aa24.85■■□□□ 1.57
CSNK1D-216ENST00000581108 DNERQ8NFT8 737 aa24.85■■□□□ 1.57
CSNK1D-216ENST00000581108 RBM47A0AV96 593 aaKnown RBP24.84■■□□□ 1.57
CSNK1D-216ENST00000581108 E7EWF7 191 aa24.84■■□□□ 1.57
CSNK1D-216ENST00000581108 TBX21Q9UL17 535 aa24.84■■□□□ 1.57
CSNK1D-216ENST00000581108 ABCB11O95342 1321 aa24.84■■□□□ 1.57
CSNK1D-216ENST00000581108 KLRF2D3W0D1 207 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 IFIT3O14879 490 aaKnown RBP24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 ZEB2O60315 1214 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 CABYRO75952 493 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 EDNRBP24530 442 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 STOX1Q6ZVD7 989 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 FBXO11Q86XK2 927 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 FAM126BQ8IXS8 530 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 MAP4K1Q92918 833 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 MPHOSPH6Q99547 160 aaKnown RBP24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 MAD2L2Q9UI95 211 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 COL6A3P12111 3177 aa24.83■■□□□ 1.57
CSNK1D-216ENST00000581108 TIMP1P01033 207 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 FPGSQ05932 587 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 CHST3Q7LGC8 479 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 SLC43A3Q8NBI5 491 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 NCOA7Q8NI08 942 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 SENP2Q9HC62 589 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 BAZ2BQ9UIF8 2168 aaKnown RBP24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 GRIN2DO15399 1336 aa24.82■■□□□ 1.56
CSNK1D-216ENST00000581108 ITGA7Q13683 1181 aa24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 RALYLQ86SE5 291 aaKnown RBP24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 SYTL5Q8TDW5 730 aaPredicted RBP24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 TAAR1Q96RJ0 339 aa24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 MTMR10Q9NXD2 777 aa24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 COL20A1Q9P218 1284 aa24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 MRPL11Q9Y3B7 192 aaKnown RBP24.81■■□□□ 1.56
CSNK1D-216ENST00000581108 PALM3A6NDB9 673 aaPredicted RBP24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 B4DLN1 442 aa24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 TLR3O15455 904 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 CD4P01730 458 aa24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 MRPL12P52815 198 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 PSMC6P62333 389 aa24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 MCF2L2Q86YR7 1114 aa24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 MAF1Q9H063 256 aa24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 RBM8AQ9Y5S9 174 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-216ENST00000581108 ERICH2A1L162 156 aa24.79■■□□□ 1.56
CSNK1D-216ENST00000581108 MFSD5Q6N075 450 aa24.79■■□□□ 1.56
CSNK1D-216ENST00000581108 OR6J1Q8NGC5 347 aa24.79■■□□□ 1.56
CSNK1D-216ENST00000581108 SCFD2Q8WU76 684 aa24.79■■□□□ 1.56
CSNK1D-216ENST00000581108 AMNQ9BXJ7 453 aa24.79■■□□□ 1.56
CSNK1D-216ENST00000581108 PPP1R11O60927 126 aaPredicted RBP24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 ANTXR2P58335 489 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 GRM4Q14833 912 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 WTAPQ15007 396 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 PPP2R5BQ15173 497 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 SLC35G1Q2M3R5 365 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 SKAP1Q86WV1 359 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 COPS5Q92905 334 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 MTMR8Q96EF0 704 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 PPP1R12CQ9BZL4 782 aa24.78■■□□□ 1.56
CSNK1D-216ENST00000581108 KIAA1217Q5T5P2 1943 aa24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 ZBTB5O15062 677 aa24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 TXNP10599 105 aaKnown RBP24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 FAM109BQ6ICB4 259 aaPredicted RBP24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 NSUN6Q8TEA1 469 aaKnown RBP24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 RNPC3Q96LT9 517 aaKnown RBP24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 RMDN3Q96TC7 470 aa24.77■■□□□ 1.56
CSNK1D-216ENST00000581108 OPLAHO14841 1288 aa24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 NKRFO15226 690 aaKnown RBP eCLIP24.76■■□□□ 1.55
CSNK1D-216ENST00000581108 ARIH2O95376 493 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms