RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CEP290O15078 2479 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 ERICH2A1L162 156 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 ASB14A6NK59 587 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 DUSP11O75319 330 aaKnown RBP14.65□□□□□ -0.06
CBX1-206ENST00000581003 PLEKHA8P1O95397 391 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
CBX1-206ENST00000581003 ACLYP53396 1101 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
CBX1-206ENST00000581003 TNFAIP2Q03169 654 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 SNX17Q15036 470 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 SH3RF1Q7Z6J0 888 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 RNF180Q86T96 592 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 FBXO11Q86XK2 927 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 ZNF654Q8IZM8 581 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 MORC4Q8TE76 937 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 TAAR1Q96RJ0 339 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
CBX1-206ENST00000581003 GNEQ9Y223 722 aaKnown RBP14.65□□□□□ -0.06
CBX1-206ENST00000581003 ABCB11O95342 1321 aa14.65□□□□□ -0.06
CBX1-206ENST00000581003 LTBP2Q14767 1821 aa14.64□□□□□ -0.07
CBX1-206ENST00000581003 FXR1P51114 621 aaKnown RBP eCLIP14.64□□□□□ -0.07
CBX1-206ENST00000581003 SART3Q15020 963 aaKnown RBP14.64□□□□□ -0.07
CBX1-206ENST00000581003 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
CBX1-206ENST00000581003 CATIPQ7Z7H3 387 aa14.64□□□□□ -0.07
CBX1-206ENST00000581003 TLK2Q86UE8 772 aa14.64□□□□□ -0.07
CBX1-206ENST00000581003 SYTL5Q8TDW5 730 aaPredicted RBP14.64□□□□□ -0.07
CBX1-206ENST00000581003 GDF15Q99988 308 aa14.64□□□□□ -0.07
CBX1-206ENST00000581003 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
CBX1-206ENST00000581003 hCG_1642624A0A1W2PR95 340 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 RBAK-RBAKDNI3L0D1 243 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 ZBTB5O15062 677 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 CFBP00751 764 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 ASGR1P07306 291 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 EDNRBP24530 442 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 HOXA13P31271 388 aaPredicted RBP14.63□□□□□ -0.07
CBX1-206ENST00000581003 MCM5P33992 734 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 GJA9P57773 515 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 TLE2Q04725 743 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 CASC1Q6TDU7 716 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 NFXL1Q6ZNB6 911 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 PPP1R13LQ8WUF5 828 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 COPS5Q92905 334 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 ZFP91Q96JP5 570 aaPredicted RBP14.63□□□□□ -0.07
CBX1-206ENST00000581003 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 PDLIM7Q9NR12 457 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 LAMA3Q16787 3333 aa14.63□□□□□ -0.07
CBX1-206ENST00000581003 TRIM43BA6NCK2 446 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 SOX1O00570 391 aaPredicted RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 DYNC1LI2O43237 492 aaPredicted RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 PQBP1O60828 265 aaKnown RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 ARIH2O95376 493 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 EIF2AK2P19525 551 aaKnown RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 ITGB8P26012 769 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 CST5P28325 142 aaPredicted RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 PDE4DQ08499 809 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 GNASQ5JWF2 1037 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 IL31RAQ8NI17 732 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 TRIM43Q96BQ3 446 aaPredicted RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 AMNQ9BXJ7 453 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 VTA1Q9NP79 307 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
CBX1-206ENST00000581003 BRPF3Q9ULD4 1205 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 PCDHA1Q9Y5I3 950 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 SZT2Q5T011 3432 aa14.62□□□□□ -0.07
CBX1-206ENST00000581003 DDAH1O94760 285 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 SLC34A2O95436 690 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 MICU3Q86XE3 530 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 WDR11Q9BZH6 1224 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 STARD7Q9NQZ5 370 aa14.61□□□□□ -0.07
CBX1-206ENST00000581003 MRPL11Q9Y3B7 192 aaKnown RBP14.61□□□□□ -0.07
CBX1-206ENST00000581003 CCDC69A6NI79 296 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 HSD17B4P51659 736 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 PSMC6P62333 389 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 EXOSC10Q01780 885 aaKnown RBP14.6□□□□□ -0.07
CBX1-206ENST00000581003 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
CBX1-206ENST00000581003 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 RGS22Q8NE09 1264 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 TMEM87BQ96K49 555 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 PNMA2Q9UL42 364 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 MYH6P13533 1939 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 GRIN2DO15399 1336 aa14.6□□□□□ -0.07
CBX1-206ENST00000581003 PNMA6FA0A0J9YX94 578 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 RBM47A0AV96 593 aaKnown RBP14.59□□□□□ -0.07
CBX1-206ENST00000581003 MOXD2PA6NHM9 499 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 SORBS3O60504 671 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 IQSEC1Q6DN90 963 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 DNERQ8NFT8 737 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 CTCFLQ8NI51 663 aaPredicted RBP14.59□□□□□ -0.07
CBX1-206ENST00000581003 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 TSEN34Q9BSV6 310 aaKnown RBP14.59□□□□□ -0.07
CBX1-206ENST00000581003 PXMP2Q9NR77 195 aa14.59□□□□□ -0.07
CBX1-206ENST00000581003 HSPA4P34932 840 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms