RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 SYNGAP1Q96PV0 1343 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 SNAI1O95863 264 aaPredicted RBP11.46□□□□□ -0.57
GGA3-209ENST00000580646 RARBP10826 455 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 ALAS1P13196 640 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 SLC16A2P36021 539 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 NEK4P51957 841 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 APOBRQ0VD83 1088 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 TRAF1Q13077 416 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 RTN1Q16799 776 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 LRRC26Q2I0M4 334 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 TMTC3Q6ZXV5 915 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 MICU3Q86XE3 530 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 MYL10Q9BUA6 226 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 PRO3102Q9H379 93 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
GGA3-209ENST00000580646 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
GGA3-209ENST00000580646 LCTP09848 1927 aa11.46□□□□□ -0.58
GGA3-209ENST00000580646 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 KBTBD13C9JR72 458 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 ZBTB5O15062 677 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 CYTH3O43739 400 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 AKR1A1P14550 325 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 PDIA3P30101 505 aaKnown RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
GGA3-209ENST00000580646 ATN1P54259 1190 aaPredicted RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 AK2P54819 239 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 LRRC41Q15345 812 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 FGD4Q96M96 766 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 A1CFQ9NQ94 594 aaKnown RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 XPNPEP3Q9NQH7 507 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
GGA3-209ENST00000580646 CCPG1Q9ULG6 757 aa11.45□□□□□ -0.58
GGA3-209ENST00000580646 SYN1P17600 705 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 CNTN2Q02246 1040 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 MUM1L1Q5H9M0 696 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 GDF15Q99988 308 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
GGA3-209ENST00000580646 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
GGA3-209ENST00000580646 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
GGA3-209ENST00000580646 ABCB11O95342 1321 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 CNTNAP5Q8WYK1 1306 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 hCG_1984214I3L0E3 225 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 DHX16O60231 1041 aaKnown RBP11.43□□□□□ -0.58
GGA3-209ENST00000580646 ST18O60284 1047 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 PFKFB2O60825 505 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 PGK1P00558 417 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 RXRAP19793 462 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 CDC27P30260 824 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 ADCYAP1R1P41586 468 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 GHRHRQ02643 423 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 FUT2Q10981 343 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 QRICH1Q2TAL8 776 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 SLC39A5Q6ZMH5 540 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 ARMCX2Q7L311 632 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 RNF180Q86T96 592 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 CCDC144CPQ8IYA2 1237 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 SRBD1Q8N5C6 995 aaKnown RBP11.43□□□□□ -0.58
GGA3-209ENST00000580646 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 ZNF713Q8N859 430 aaPredicted RBP11.43□□□□□ -0.58
GGA3-209ENST00000580646 RGS22Q8NE09 1264 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 RRP36Q96EU6 259 aaKnown RBP11.43□□□□□ -0.58
GGA3-209ENST00000580646 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 ABHD16BQ9H3Z7 469 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 TPCN1Q9ULQ1 816 aa11.43□□□□□ -0.58
GGA3-209ENST00000580646 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 MCM3APO60318 1980 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 IFNAR1P17181 557 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 BMP8BP34820 402 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 MCM2P49736 904 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 RTP1P59025 263 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 NTRK3Q16288 839 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 FERMT2Q96AC1 680 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
GGA3-209ENST00000580646 PIGSQ96S52 555 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 RNF26Q9BY78 433 aaPredicted RBP11.42□□□□□ -0.58
GGA3-209ENST00000580646 MAP3K20Q9NYL2 800 aaKnown RBP11.42□□□□□ -0.58
GGA3-209ENST00000580646 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 SEC63Q9UGP8 760 aaKnown RBP11.42□□□□□ -0.58
GGA3-209ENST00000580646 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
GGA3-209ENST00000580646 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms