RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 VPS37CA5D8V6 355 aaPredicted RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 GPR25O00155 361 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 LACTBP83111 547 aaPredicted RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 GHRHRQ02643 423 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 PWP2Q15269 919 aaKnown RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 Q3C1V9 767 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 KRT40Q6A162 431 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 GPR142Q7Z601 462 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 BLIDQ8IZY5 108 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 SPRYD3Q8NCJ5 442 aa13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 CCDC194A0A1B0GVG4 234 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 STX6O43752 255 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 HSD17B4P51659 736 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 PRMT2P55345 433 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 NUCB2P80303 420 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 KRT25Q7Z3Z0 450 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 TRMT44Q8IYL2 757 aaKnown RBP13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 NUDT12Q9BQG2 462 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 CYP39A1Q9NYL5 469 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 CIZ1Q9ULV3 898 aaPredicted RBP13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
SNORD3C-201ENST00000580533 NFIBO00712 420 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 SYT1P21579 422 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 PTPREP23469 700 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 RGS2P41220 211 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 PSMC4P43686 418 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 RPS6P62753 249 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 GRB14Q14449 540 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 BRAPQ7Z569 592 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 DPP9Q86TI2 863 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 NSUN6Q8TEA1 469 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 PORCNQ9H237 461 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 A1CFQ9NQ94 594 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 KCNJ14Q9UNX9 436 aa13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 DIS3Q9Y2L1 958 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 RBBP6Q7Z6E9 1792 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
SNORD3C-201ENST00000580533 FOSBP53539 338 aa13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 BAATQ14032 418 aaPredicted RBP13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 NONOQ15233 471 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 XRRA1Q6P2D8 792 aa13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 MSL3Q8N5Y2 521 aaKnown RBP13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 IWS1Q96ST2 819 aa13.43□□□□□ -0.26
SNORD3C-201ENST00000580533 ZNF236Q9UL36 1845 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 ASB14A6NK59 587 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 MEIS2O14770 477 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 STAM2O75886 525 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 ADORA2AP29274 412 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 CTCFP49711 727 aaPredicted RBP13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 GUCY1B3Q02153 619 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 MAP2K5Q13163 448 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 ARHGEF16Q5VV41 709 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 FCHSD1Q86WN1 690 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 APBA2Q99767 749 aa13.42□□□□□ -0.26
SNORD3C-201ENST00000580533 OPLAHO14841 1288 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 ZSCAN22P10073 491 aaPredicted RBP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 CCND2P30279 289 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 TRAPPC10P48553 1259 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 CLK2P49760 499 aaKnown RBP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 ZNF296Q8WUU4 475 aaPredicted RBP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
SNORD3C-201ENST00000580533 BTBD18B2RXH4 712 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 PEX10O60683 326 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 HOXC6P09630 235 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 UBE2SQ16763 222 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 RILPL1Q5EBL4 403 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 MORN1Q5T089 497 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 FAM133AQ8N9E0 248 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 CD99L2Q8TCZ2 262 aa13.4□□□□□ -0.26
SNORD3C-201ENST00000580533 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms