RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 LETM2Q2VYF4 491 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 KIAA1524Q8TCG1 905 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TBCKQ8TEA7 893 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 HOOK2Q96ED9 719 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ANO10Q9NW15 660 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 EDIL3O43854 480 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PEX10O60683 326 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 FLOT1O75955 427 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MAP3K9P80192 1104 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZNF592Q92610 1267 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 AGBL1Q96MI9 1066 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC94Q9BW85 323 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 AMNQ9BXJ7 453 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 NMRK2Q9NPI5 230 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 OPLAHO14841 1288 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CMA1P23946 247 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CEP57L1Q8IYX8 460 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SMCHD1A6NHR9 2005 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CAVIN2O95810 425 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CDC25AP30304 524 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SYKP43405 635 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CHURC1Q8WUH1 139 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 RIC8AQ9NPQ8 531 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SYNPO2Q9UMS6 1093 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZNF75DP51815 510 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 IL17AQ16552 155 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 MEIS2O14770 477 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CCNT1O60563 726 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NONOQ15233 471 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 GALNT17Q6IS24 598 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CUL5Q93034 780 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 GJA10Q969M2 543 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CSRNP2Q9H175 543 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 KIAA1468Q9P260 1216 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 FEM1BQ9UK73 627 aa14.38□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 VWA3AA6NCI4 1184 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 IRF6O14896 467 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PPP6R2O75170 966 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 IQCB1Q15051 598 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PNMA8AQ86V59 439 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 KRI1Q8N9T8 703 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 RAVER2Q9HCJ3 691 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CSADQ9Y600 493 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZC3H4Q9UPT8 1303 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 WDR46O15213 610 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PTPREP23469 700 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PDILTQ8N807 584 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 LPAR1Q92633 364 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ATG4CQ96DT6 458 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SLF1Q9BQI6 1058 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 RANBP17Q9H2T7 1088 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 AS3MTQ9HBK9 375 aa14.37□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZNF536O15090 1300 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TDP2O95551 362 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CFBP00751 764 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CLK2P49760 499 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 LDHDQ86WU2 507 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PLA2G4DQ86XP0 818 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 C4orf32Q8N8J7 132 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PRPF38AQ8NAV1 312 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CACTINQ8WUQ7 758 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 hCG_1984214I3L0E3 225 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 IREB2P48200 963 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 MKRN3Q13064 507 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TREML2Q5T2D2 321 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 FILIP1Q7Z7B0 1213 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ZNF713Q8N859 430 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PRIMPOLQ96LW4 560 aa14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ATAD5Q96QE3 1844 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NF2P35240 595 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 UBXN2AP68543 259 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms