RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MFAP1P55081 439 aaKnown RBP21.06■□□□□ 0.96
MKS1-209ENST00000580127 CCL23P55773 120 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 PDE4DQ08499 809 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 MFSD6Q6ZSS7 791 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 OTOP2Q7RTS6 562 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 ATXN2LQ8WWM7 1075 aaKnown RBP21.06■□□□□ 0.96
MKS1-209ENST00000580127 PPM1EQ8WY54 764 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 TMEM47Q9BQJ4 181 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 NOC4LQ9BVI4 516 aaKnown RBP21.06■□□□□ 0.96
MKS1-209ENST00000580127 PRDM12Q9H4Q4 367 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 GPCPD1Q9NPB8 672 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 B4GALT4O60513 344 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 IGFBP4P22692 258 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 RNF207Q6ZRF8 634 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 IL27Q8NEV9 243 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 ALDH8A1Q9H2A2 487 aaPredicted RBP21.05■□□□□ 0.96
MKS1-209ENST00000580127 PRDM6Q9NQX0 595 aa21.05■□□□□ 0.96
MKS1-209ENST00000580127 MYL3P08590 195 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 ACTN1P12814 892 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 CALML3P27482 149 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 PSMC6P62333 389 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 CCDC178Q5BJE1 867 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
MKS1-209ENST00000580127 RNF41Q9H4P4 317 aaPredicted RBP21.04■□□□□ 0.96
MKS1-209ENST00000580127 GRIN2DO15399 1336 aa21.04■□□□□ 0.96
MKS1-209ENST00000580127 ZBBXA8MT70 800 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 NT5C2P49902 561 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 PDE1AP54750 535 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 RETREG2Q8NC44 543 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 DNERQ8NFT8 737 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 OR6J1Q8NGC5 347 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 SCFD2Q8WU76 684 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 MAF1Q9H063 256 aa21.03■□□□□ 0.96
MKS1-209ENST00000580127 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
MKS1-209ENST00000580127 RBM47A0AV96 593 aaKnown RBP21.02■□□□□ 0.96
MKS1-209ENST00000580127 FOXP2O15409 715 aa21.02■□□□□ 0.96
MKS1-209ENST00000580127 PPP2R5BQ15173 497 aa21.02■□□□□ 0.96
MKS1-209ENST00000580127 GPATCH4Q5T3I0 446 aaKnown RBP21.02■□□□□ 0.96
MKS1-209ENST00000580127 NKX2-4Q9H2Z4 354 aa21.02■□□□□ 0.96
MKS1-209ENST00000580127 PCDHA11Q9Y5I1 949 aa21.02■□□□□ 0.96
MKS1-209ENST00000580127 TNKSO95271 1327 aa21.02■□□□□ 0.95
MKS1-209ENST00000580127 FRMPD2Q68DX3 1309 aaPredicted RBP21.02■□□□□ 0.95
MKS1-209ENST00000580127 TRIM6-TRIM34B2RNG4 842 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 TNFRSF10AO00220 468 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 NFIBO00712 420 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 HSPD1P10809 573 aaKnown RBP21.01■□□□□ 0.95
MKS1-209ENST00000580127 RFC2P35250 354 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 MRPS5P82675 430 aaKnown RBP21.01■□□□□ 0.95
MKS1-209ENST00000580127 PURAQ00577 322 aaKnown RBP21.01■□□□□ 0.95
MKS1-209ENST00000580127 RGS22Q8NE09 1264 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 ESR2Q92731 530 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 PURBQ96QR8 312 aaKnown RBP21.01■□□□□ 0.95
MKS1-209ENST00000580127 THEGQ9P2T0 379 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 DDX49Q9Y6V7 483 aaKnown RBP21.01■□□□□ 0.95
MKS1-209ENST00000580127 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
MKS1-209ENST00000580127 PDHBP11177 359 aa21■□□□□ 0.95
MKS1-209ENST00000580127 ATP2A2P16615 1042 aaKnown RBP21■□□□□ 0.95
MKS1-209ENST00000580127 PTPN11Q06124 597 aaPredicted RBP21■□□□□ 0.95
MKS1-209ENST00000580127 ZNF543Q08ER8 600 aa21■□□□□ 0.95
MKS1-209ENST00000580127 CCDC85BQ15834 202 aaPredicted RBP21■□□□□ 0.95
MKS1-209ENST00000580127 FAM47CQ5HY64 1035 aa21■□□□□ 0.95
MKS1-209ENST00000580127 PPP2R2DQ66LE6 453 aa21■□□□□ 0.95
MKS1-209ENST00000580127 NFRKBQ6P4R8 1299 aa21■□□□□ 0.95
MKS1-209ENST00000580127 USP38Q8NB14 1042 aa21■□□□□ 0.95
MKS1-209ENST00000580127 FAM227BQ96M60 508 aa21■□□□□ 0.95
MKS1-209ENST00000580127 NOD1Q9Y239 953 aa21■□□□□ 0.95
MKS1-209ENST00000580127 TTC28Q96AY4 2481 aa21■□□□□ 0.95
MKS1-209ENST00000580127 UMODL1Q5DID0 1318 aa21■□□□□ 0.95
MKS1-209ENST00000580127 WDR19Q8NEZ3 1342 aa21■□□□□ 0.95
MKS1-209ENST00000580127 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
MKS1-209ENST00000580127 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 TXNP10599 105 aaKnown RBP20.99■□□□□ 0.95
MKS1-209ENST00000580127 RPS6P62753 249 aaKnown RBP20.99■□□□□ 0.95
MKS1-209ENST00000580127 BFSP2Q13515 415 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
MKS1-209ENST00000580127 AAMPQ13685 434 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 TTLL4Q14679 1199 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 IQCA1Q86XH1 822 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 ASB2Q96Q27 587 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 WNT8AQ9H1J5 351 aa20.99■□□□□ 0.95
MKS1-209ENST00000580127 TRMT13Q9NUP7 481 aaKnown RBP20.99■□□□□ 0.95
MKS1-209ENST00000580127 PRUNE2Q8WUY3 3088 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 ZNF213O14771 459 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 NBPF20Q3BBV1 942 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 TMEM67Q5HYA8 995 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 RASGRP2Q7LDG7 609 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 RILPL2Q969X0 211 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 SCLYQ96I15 445 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
MKS1-209ENST00000580127 A0A0D9SFI3 127 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 A6NJR5 290 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 CYP2C9P11712 490 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 RRP1P56182 461 aaKnown RBP20.97■□□□□ 0.95
MKS1-209ENST00000580127 HAND2P61296 217 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 AAK1Q2M2I8 961 aa20.97■□□□□ 0.95
MKS1-209ENST00000580127 TMEM63BQ5T3F8 832 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms