RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 UMODL1Q5DID0 1318 aa22.97■■□□□ 1.27
SPECC1-213ENST00000579688 CHD7Q9P2D1 2997 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 PDHBP11177 359 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 PSMC6P62333 389 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 DUSP28Q4G0W2 176 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 HERVK_113Q902F9 699 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 TRPV6Q9H1D0 765 aa22.96■■□□□ 1.27
SPECC1-213ENST00000579688 MUC3AQ02505 3323 aa22.95■■□□□ 1.27
SPECC1-213ENST00000579688 LOC102724159A0A0B4J2E5 919 aa22.95■■□□□ 1.26
SPECC1-213ENST00000579688 B4GALT4O60513 344 aa22.95■■□□□ 1.26
SPECC1-213ENST00000579688 HAND2P61296 217 aa22.95■■□□□ 1.26
SPECC1-213ENST00000579688 NMIQ13287 307 aaPredicted RBP22.95■■□□□ 1.26
SPECC1-213ENST00000579688 PWP2Q15269 919 aaKnown RBP22.95■■□□□ 1.26
SPECC1-213ENST00000579688 SLC30A10Q6XR72 485 aa22.95■■□□□ 1.26
SPECC1-213ENST00000579688 USP38Q8NB14 1042 aa22.95■■□□□ 1.26
SPECC1-213ENST00000579688 NOC4LQ9BVI4 516 aaKnown RBP22.95■■□□□ 1.26
SPECC1-213ENST00000579688 CXXC1Q9P0U4 656 aaPredicted RBP22.95■■□□□ 1.26
SPECC1-213ENST00000579688 SCN10AQ9Y5Y9 1956 aa22.94■■□□□ 1.26
SPECC1-213ENST00000579688 CCDC171Q6TFL3 1326 aa22.94■■□□□ 1.26
SPECC1-213ENST00000579688 PTPDC1A2A3K4 754 aa22.94■■□□□ 1.26
SPECC1-213ENST00000579688 CLEC4DQ8WXI8 215 aa22.94■■□□□ 1.26
SPECC1-213ENST00000579688 WDR11Q9BZH6 1224 aa22.94■■□□□ 1.26
SPECC1-213ENST00000579688 MTIF3Q9H2K0 278 aaKnown RBP22.94■■□□□ 1.26
SPECC1-213ENST00000579688 MYH6P13533 1939 aa22.93■■□□□ 1.26
SPECC1-213ENST00000579688 FGBP02675 491 aa22.93■■□□□ 1.26
SPECC1-213ENST00000579688 CCL23P55773 120 aa22.93■■□□□ 1.26
SPECC1-213ENST00000579688 ZNF543Q08ER8 600 aa22.93■■□□□ 1.26
SPECC1-213ENST00000579688 WNT8AQ9H1J5 351 aa22.93■■□□□ 1.26
SPECC1-213ENST00000579688 SCN5AQ14524 2016 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 RBM47A0AV96 593 aaKnown RBP22.92■■□□□ 1.26
SPECC1-213ENST00000579688 SNHG28P0DPA3 235 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 PCP11498 1178 aaKnown RBP22.92■■□□□ 1.26
SPECC1-213ENST00000579688 CALML3P27482 149 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 RAB30Q15771 203 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 AKNAD1Q5T1N1 836 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 RNF207Q6ZRF8 634 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 TBC1D10CQ8IV04 446 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 TTC14Q96N46 770 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 LNPKQ9C0E8 428 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 ALDH8A1Q9H2A2 487 aaPredicted RBP22.92■■□□□ 1.26
SPECC1-213ENST00000579688 PRDM12Q9H4Q4 367 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 PNMA2Q9UL42 364 aa22.92■■□□□ 1.26
SPECC1-213ENST00000579688 WDR19Q8NEZ3 1342 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 TRIM6-TRIM34B2RNG4 842 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 CPT1AP50416 773 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 PURAQ00577 322 aaKnown RBP22.91■■□□□ 1.26
SPECC1-213ENST00000579688 MFSD6Q6ZSS7 791 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 OTOP2Q7RTS6 562 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 GAS2L1Q99501 681 aaPredicted RBP22.91■■□□□ 1.26
SPECC1-213ENST00000579688 POLR3EQ9NVU0 708 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 MSRAQ9UJ68 235 aa22.91■■□□□ 1.26
SPECC1-213ENST00000579688 TANC1Q9C0D5 1861 aa22.9■■□□□ 1.26
SPECC1-213ENST00000579688 RPS6P62753 249 aaKnown RBP22.9■■□□□ 1.26
SPECC1-213ENST00000579688 EDNRBP24530 442 aa22.89■■□□□ 1.25
SPECC1-213ENST00000579688 PDE4DQ08499 809 aa22.89■■□□□ 1.25
SPECC1-213ENST00000579688 RPUSD2Q8IZ73 545 aaKnown RBP22.89■■□□□ 1.25
SPECC1-213ENST00000579688 OR6J1Q8NGC5 347 aa22.89■■□□□ 1.25
SPECC1-213ENST00000579688 SYMPKQ92797 1274 aaKnown RBP22.89■■□□□ 1.25
SPECC1-213ENST00000579688 RILPL2Q969X0 211 aa22.89■■□□□ 1.25
SPECC1-213ENST00000579688 RNF41Q9H4P4 317 aaPredicted RBP22.89■■□□□ 1.25
SPECC1-213ENST00000579688 TRMT13Q9NUP7 481 aaKnown RBP22.89■■□□□ 1.25
SPECC1-213ENST00000579688 KIAA1217Q5T5P2 1943 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 TNKSO95271 1327 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 NEDD4P46934 1319 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 MYL3P08590 195 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 PPP2R5BQ15173 497 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 DNERQ8NFT8 737 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 VWCEQ96DN2 955 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 SCLYQ96I15 445 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 MPHOSPH6Q99547 160 aaKnown RBP22.88■■□□□ 1.25
SPECC1-213ENST00000579688 NKX2-4Q9H2Z4 354 aa22.88■■□□□ 1.25
SPECC1-213ENST00000579688 YBX2Q9Y2T7 364 aaKnown RBP22.88■■□□□ 1.25
SPECC1-213ENST00000579688 REV3LO60673 3130 aa22.87■■□□□ 1.25
SPECC1-213ENST00000579688 NKRFO15226 690 aaKnown RBP eCLIP22.87■■□□□ 1.25
SPECC1-213ENST00000579688 SUPT20HL2P0C7V6 817 aa22.87■■□□□ 1.25
SPECC1-213ENST00000579688 CYP2C9P11712 490 aa22.87■■□□□ 1.25
SPECC1-213ENST00000579688 MFAP1P55081 439 aaKnown RBP22.87■■□□□ 1.25
SPECC1-213ENST00000579688 GPATCH4Q5T3I0 446 aaKnown RBP22.87■■□□□ 1.25
SPECC1-213ENST00000579688 ESR2Q92731 530 aa22.87■■□□□ 1.25
SPECC1-213ENST00000579688 ZKSCAN3Q9BRR0 538 aa22.87■■□□□ 1.25
SPECC1-213ENST00000579688 MTG1Q9BT17 334 aaPredicted RBP22.87■■□□□ 1.25
SPECC1-213ENST00000579688 GPHNQ9NQX3 736 aaPredicted RBP22.87■■□□□ 1.25
SPECC1-213ENST00000579688 RAD50Q92878 1312 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 GOLGA8HP0CJ92 632 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 SDSP20132 328 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 ADGRE1Q14246 886 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 USH1GQ495M9 461 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 TJAP1Q5JTD0 557 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 SMC5Q8IY18 1101 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 SCFD2Q8WU76 684 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 SLC28A3Q9HAS3 691 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 PRDM6Q9NQX0 595 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 SLC4A7Q9Y6M7 1214 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 TRANK1O15050 2925 aa22.86■■□□□ 1.25
SPECC1-213ENST00000579688 PFKMP08237 780 aa22.85■■□□□ 1.25
SPECC1-213ENST00000579688 BRDTQ58F21 947 aaPredicted RBP22.85■■□□□ 1.25
SPECC1-213ENST00000579688 DGKHQ86XP1 1220 aa22.85■■□□□ 1.25
SPECC1-213ENST00000579688 PPM1EQ8WY54 764 aa22.85■■□□□ 1.25
SPECC1-213ENST00000579688 CPVLQ9H3G5 476 aa22.85■■□□□ 1.25
SPECC1-213ENST00000579688 TRIP12Q14669 1992 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms