RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ALDH5A1P51649 535 aaPredicted RBP27.76■■■□□ 2.03
LIMD2-207ENST00000579329 BLOC1S2Q6QNY1 142 aa27.76■■■□□ 2.03
LIMD2-207ENST00000579329 PURBQ96QR8 312 aaKnown RBP27.76■■■□□ 2.03
LIMD2-207ENST00000579329 USP26Q9BXU7 913 aa27.76■■■□□ 2.03
LIMD2-207ENST00000579329 MCM3APO60318 1980 aa27.76■■■□□ 2.03
LIMD2-207ENST00000579329 ALPK3Q96L96 1907 aa27.76■■■□□ 2.03
LIMD2-207ENST00000579329 PNMA6FA0A0J9YX94 578 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 DNM1LO00429 736 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 PPP1R11O60927 126 aaPredicted RBP27.75■■■□□ 2.03
LIMD2-207ENST00000579329 PSMA5P28066 241 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 APOA5Q6Q788 366 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 MICU3Q86XE3 530 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 MORC4Q8TE76 937 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 KATNBL1Q9H079 304 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 XPNPEP3Q9NQH7 507 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 PCDHA1Q9Y5I3 950 aa27.75■■■□□ 2.03
LIMD2-207ENST00000579329 FGD1P98174 961 aa27.74■■■□□ 2.03
LIMD2-207ENST00000579329 RAB11FIP4Q86YS3 637 aa27.74■■■□□ 2.03
LIMD2-207ENST00000579329 DNERQ8NFT8 737 aa27.74■■■□□ 2.03
LIMD2-207ENST00000579329 MPHOSPH6Q99547 160 aaKnown RBP27.74■■■□□ 2.03
LIMD2-207ENST00000579329 PRO3102Q9H379 93 aa27.74■■■□□ 2.03
LIMD2-207ENST00000579329 LRRC37A2A6NM11 1700 aa27.74■■■□□ 2.03
LIMD2-207ENST00000579329 KBTBD13C9JR72 458 aa27.73■■■□□ 2.03
LIMD2-207ENST00000579329 PLEKHA8P1O95397 391 aa27.73■■■□□ 2.03
LIMD2-207ENST00000579329 COL6A1P12109 1028 aa27.73■■■□□ 2.03
LIMD2-207ENST00000579329 CPA1P15085 419 aa27.73■■■□□ 2.03
LIMD2-207ENST00000579329 FANCBQ8NB91 859 aa27.73■■■□□ 2.03
LIMD2-207ENST00000579329 RRP36Q96EU6 259 aaKnown RBP27.73■■■□□ 2.03
LIMD2-207ENST00000579329 CCDC144BQ3MJ40 725 aa27.72■■■□□ 2.03
LIMD2-207ENST00000579329 GJC2Q5T442 439 aaPredicted RBP27.72■■■□□ 2.03
LIMD2-207ENST00000579329 TBC1D5Q92609 795 aa27.72■■■□□ 2.03
LIMD2-207ENST00000579329 NR2E3Q9Y5X4 410 aa27.72■■■□□ 2.03
LIMD2-207ENST00000579329 B4DLN1 442 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 ZBTB43O43298 467 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 MYCNP04198 464 aaPredicted RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 RPS6KB1P23443 525 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 MRPL12P52815 198 aaKnown RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 LRRC41Q15345 812 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 SRBD1Q8N5C6 995 aaKnown RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 SYTL5Q8TDW5 730 aaPredicted RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 PIBF1Q8WXW3 757 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 LENG1Q96BZ8 264 aaPredicted RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 VTA1Q9NP79 307 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 RBM28Q9NW13 759 aaKnown RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 SEC63Q9UGP8 760 aaKnown RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 BRPF3Q9ULD4 1205 aa27.71■■■□□ 2.03
LIMD2-207ENST00000579329 DDX49Q9Y6V7 483 aaKnown RBP27.71■■■□□ 2.03
LIMD2-207ENST00000579329 KLF18A0A0U1RQI7 1052 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 EIF5BO60841 1220 aaKnown RBP27.7■■■□□ 2.02
LIMD2-207ENST00000579329 DUSP11O75319 330 aaKnown RBP27.7■■■□□ 2.02
LIMD2-207ENST00000579329 CFBP00751 764 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 CASTP20810 708 aaKnown RBP27.7■■■□□ 2.02
LIMD2-207ENST00000579329 GHRHRQ02643 423 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 Q6ZUG5 572 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 TMTC3Q6ZXV5 915 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 RNF180Q86T96 592 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 FBXO16Q8IX29 292 aaPredicted RBP27.7■■■□□ 2.02
LIMD2-207ENST00000579329 SAMD3Q8N6K7 520 aa27.7■■■□□ 2.02
LIMD2-207ENST00000579329 BAZ2BQ9UIF8 2168 aaKnown RBP27.69■■■□□ 2.02
LIMD2-207ENST00000579329 OPLAHO14841 1288 aa27.69■■■□□ 2.02
LIMD2-207ENST00000579329 PGK1P00558 417 aa27.69■■■□□ 2.02
LIMD2-207ENST00000579329 RCAN1P53805 252 aa27.69■■■□□ 2.02
LIMD2-207ENST00000579329 PDE4DQ08499 809 aa27.69■■■□□ 2.02
LIMD2-207ENST00000579329 EEPD1Q7L9B9 569 aa27.69■■■□□ 2.02
LIMD2-207ENST00000579329 MAP3K20Q9NYL2 800 aaKnown RBP27.69■■■□□ 2.02
LIMD2-207ENST00000579329 SYNRGQ9UMZ2 1314 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 ADAMTS4O75173 837 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 EDNRBP24530 442 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 HSD17B4P51659 736 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 RTN1Q16799 776 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 FBXL16Q8N461 479 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 SENP6Q9GZR1 1112 aaPredicted RBP27.68■■■□□ 2.02
LIMD2-207ENST00000579329 COL20A1Q9P218 1284 aa27.68■■■□□ 2.02
LIMD2-207ENST00000579329 GOLGA8AA7E2F4 631 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 GOLGA8BA8MQT2 603 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 ADCY6O43306 1168 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 EVI5O60447 810 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 ADCYAP1R1P41586 468 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 TNFAIP2Q03169 654 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 CMTR1Q8N1G2 835 aaKnown RBP27.67■■■□□ 2.02
LIMD2-207ENST00000579329 NSUN6Q8TEA1 469 aaKnown RBP27.67■■■□□ 2.02
LIMD2-207ENST00000579329 BRF1Q92994 677 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 TAAR1Q96RJ0 339 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 SPC25Q9HBM1 224 aa27.67■■■□□ 2.02
LIMD2-207ENST00000579329 NAP1L2Q9ULW6 460 aaPredicted RBP27.67■■■□□ 2.02
LIMD2-207ENST00000579329 IQSEC1Q6DN90 963 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 TAPT1Q6NXT6 567 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 RUFY3Q7L099 469 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 RMDN3Q96TC7 470 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 AGXT2Q9BYV1 514 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 TM6SF1Q9BZW5 370 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 ZSWIM6Q9HCJ5 1215 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 PDGFCQ9NRA1 345 aa27.66■■■□□ 2.02
LIMD2-207ENST00000579329 LAMA3Q16787 3333 aa27.65■■■□□ 2.02
LIMD2-207ENST00000579329 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.65■■■□□ 2.02
LIMD2-207ENST00000579329 GCOM1H8Y6P7 765 aaPredicted RBP27.65■■■□□ 2.02
LIMD2-207ENST00000579329 POLR2MP0CAP2 368 aa27.65■■■□□ 2.02
LIMD2-207ENST00000579329 APOBRQ0VD83 1088 aa27.65■■■□□ 2.02
LIMD2-207ENST00000579329 NOL8Q76FK4 1167 aaKnown RBP27.65■■■□□ 2.02
LIMD2-207ENST00000579329 CCDC82Q8N4S0 544 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms