RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 UMODL1Q5DID0 1318 aa12.58□□□□□ -0.4
CSNK1D-210ENST00000579308 NFIBO00712 420 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 FGBP02675 491 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 PSMC6P62333 389 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 SYDE2Q5VT97 1194 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 KIAA1211Q6ZU35 1233 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 CHD7Q9P2D1 2997 aa12.57□□□□□ -0.4
CSNK1D-210ENST00000579308 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 PDHBP11177 359 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ALDH5A1P51649 535 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 RRP1P56182 461 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ADGRE1Q14246 886 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 TTC14Q96N46 770 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ADD3Q9UEY8 706 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
CSNK1D-210ENST00000579308 EDNRBP24530 442 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 CCL23P55773 120 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 PURAQ00577 322 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 RAB30Q15771 203 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 PRDM12Q9H4Q4 367 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-210ENST00000579308 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 POLR3EQ9NVU0 708 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 MSRAQ9UJ68 235 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 MCM3APO60318 1980 aa12.54□□□□□ -0.4
CSNK1D-210ENST00000579308 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 A6NJR5 290 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 HAND2P61296 217 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 TJAP1Q5JTD0 557 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 TBC1D10CQ8IV04 446 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 DNERQ8NFT8 737 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
CSNK1D-210ENST00000579308 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 CYP2C9P11712 490 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 CALML3P27482 149 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 CPT1AP50416 773 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 RABGGTBP53611 331 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 DGKHQ86XP1 1220 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 ATXN2LQ8WWM7 1075 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 ANKS1AQ92625 1134 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 SCLYQ96I15 445 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 MAF1Q9H063 256 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 TNKSO95271 1327 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
CSNK1D-210ENST00000579308 KPNA6O60684 536 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 PFKMP08237 780 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 MYL3P08590 195 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 MYOGP15173 224 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 SDSP20132 328 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 PDE4DQ08499 809 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 CCDC62Q6P9F0 684 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 COPS5Q92905 334 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 SLC28A3Q9HAS3 691 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 PCDHA11Q9Y5I1 949 aa12.51□□□□□ -0.41
CSNK1D-210ENST00000579308 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
CSNK1D-210ENST00000579308 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-210ENST00000579308 NT5C2P49902 561 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms